BS22989.complete Sequence
473 bp assembled on 2011-02-02
GenBank Submission: KX805144
> BS22989.complete
GAAGTTATCAGTCGACATGCTGCGAGGTCTGGTGCGATTCCTGGCGCTGC
CTCCGACCGCTGTGCGCTGCAAGTCGAATCTGGACTACTCCCGCTTTCCC
GTGCTTCAGGAGTCCGATATCGAGGAGACCTTCATGCGGGGCAGTGGTCC
TGGTGGCCAGGCTGTCAACAAGACATCCAACTGCGTGTTCTTGCGCCATC
TACCCACCAATATAACGGTCAAGTGTCACACACATCGTCTAGCATCAAAG
AATCGAGTGGAGGCTCGTAAACTTCTACTGGAAAAACTGGACGTGCATCT
AAACGGGGAGCATTCAATTGCCGCGCAAGTCAAGGCACAAGAGCAGAGAA
AGTCCACTGAGCGGCGGCGGCGACAGGAAAAGCTGCAAGAAATGAAGAAA
AGCTGGCAGGATAGAGAGCGCACAGATGGGGGAACCAAATCTACCGATAA
AGAGTGAAAGCTTTCTAGACCAT
BS22989.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:05:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30100-RB | 441 | CG30100-PB | 1..441 | 17..457 | 2145 | 99.1 | Plus |
| CG30100-RA | 441 | CG30100-PA | 1..441 | 17..457 | 2145 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:05:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42372-RA | 762 | CG42372-RA | 308..755 | 17..464 | 2150 | 98.7 | Plus |
| CG42372-RC | 697 | CG42372-RC | 243..690 | 17..464 | 2150 | 98.7 | Plus |
| CG30100-RB | 697 | CG30100-RB | 243..690 | 17..464 | 2150 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:05:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16291815..16292262 | 17..464 | 2150 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:05:14 has no hits.
BS22989.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-02 09:57:13 Download gff for
BS22989.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42372-RA | 308..747 | 17..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:46:13 Download gff for
BS22989.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42372-RA | 308..747 | 17..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:50:47 Download gff for
BS22989.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30100-RB | 243..682 | 17..456 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:50:47 Download gff for
BS22989.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16291815..16292254 | 17..456 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:46:13 Download gff for
BS22989.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12179320..12179759 | 17..456 | 99 | | Plus |
BS22989.pep Sequence
Translation from 16 to 456
> BS22989.pep
MLRGLVRFLALPPTAVRCKSNLDYSRFPVLQESDIEETFMRGSGPGGQAV
NKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLLLEKLDVHLNGEHS
IAAQVKAQEQRKSTERRRRQEKLQEMKKSWQDRERTDGGTKSTDKE*
BS22989.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:00:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30100-PB | 146 | CG30100-PB | 1..146 | 1..146 | 754 | 100 | Plus |
| CG30100-PA | 146 | CG30100-PA | 1..146 | 1..146 | 754 | 100 | Plus |
