Clone BS23010 Report

Search the DGRC for BS23010

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:230
Well:10
Vector:pDNR-Dual
Associated Gene/TranscriptCG30109-RB
Protein status:BS23010.pep: full length peptide match
Sequenced Size:299

Clone Sequence Records

BS23010.complete Sequence

299 bp assembled on 2011-02-02

GenBank Submission: KX804749

> BS23010.complete
GAAGTTATCAGTCGACATGAACAGCATTGGCGAGGATTGCAATGAGCTAA
AGAAGCAGTACGACGCCTGCTTCAACAGCTGGTTCTCGGAAGGCTTCCTT
AAGGGCCAGACGGATGACTCGGGCTGCGCGCCGATTTTCCGGGTCTATCA
GGAGTGCGTCAAGCGCGCCATGAGGGAGCAAAAGATTGAGCTGCGGGAGG
TCGGATCTGAGTACTGCACCGGCTCGGAGTACGACAATGCGAGTAGTTCC
GGCGGAAAGACGCAACCCAAGACAAAAAGTTGAAAGCTTTCTAGACCAT

BS23010.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:05:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG30109-RB 267 CG30109-PB 1..267 17..283 1335 100 Plus
CG30108-RB 267 CG30108-PB 1..170 17..186 445 84.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:05:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG30109-RB 609 CG30109-RB 101..367 17..283 1335 100 Plus
CG30108-RB 552 CG30108-RB 92..261 17..186 445 84.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:05:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17670182..17670328 17..163 735 100 Plus
2R 25286936 2R 17670385..17670506 162..283 610 100 Plus
2R 25286936 2R 17669486..17669632 17..163 405 85 Plus
Blast to na_te.dros performed on 2014-11-26 22:05:04 has no hits.

BS23010.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-02 09:57:13 Download gff for BS23010.complete
Subject Subject Range Query Range Percent Splice Strand
CG30109-RA 778..1043 17..282 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:46:07 Download gff for BS23010.complete
Subject Subject Range Query Range Percent Splice Strand
CG30109-RB 101..366 17..282 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:50:42 Download gff for BS23010.complete
Subject Subject Range Query Range Percent Splice Strand
CG30109-RB 101..366 17..282 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:50:42 Download gff for BS23010.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17670182..17670328 17..163 100 -> Plus
2R 17670387..17670505 164..282 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:46:07 Download gff for BS23010.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13557892..13558010 164..282 100   Plus
arm_2R 13557687..13557833 17..163 100 -> Plus

BS23010.pep Sequence

Translation from 16 to 282

> BS23010.pep
MNSIGEDCNELKKQYDACFNSWFSEGFLKGQTDDSGCAPIFRVYQECVKR
AMREQKIELREVGSEYCTGSEYDNASSSGGKTQPKTKS*

BS23010.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:00:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG30109-PB 88 CG30109-PB 1..88 1..88 476 100 Plus
CG30108-PB 88 CG30108-PB 1..88 1..88 318 67 Plus