Clone BS23044 Report

Search the DGRC for BS23044

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:230
Well:44
Vector:pDNR-Dual
Associated Gene/TranscriptCG13843-RA
Protein status:BS23044.pep: full length peptide match
Sequenced Size:1121

Clone Sequence Records

BS23044.complete Sequence

1121 bp assembled on 2011-02-02

GenBank Submission: KX804880

> BS23044.complete
GAAGTTATCAGTCGACATGATTGCCAAGCTAAAGCAGGAATATGCGGAGC
GCTGGCATTATCCTCCAATTGTGCCGCCAGCCAAGCTTCGATATGTTGCA
TGTGGAAAGGTAGCATTCTACGGCCACAACGATAAGCCGAAATACAAGCC
CTGCTGGCAGCATCCGCTCAATGTGCAGGATCAAACCCGCTTTGGAGTTT
GCTGGGAGTATCCGCCGGAGCGGTACAAGCGTCGTCCGCTTCCGCCACCG
TGCCGGGGATCGACCATTCCCATCCATTTGCTGAAGCCAACCTTCAAGCA
TTGTGAGAATATCTACTCCCGCTACGATTTTAAGCTTGAGCAGTGTGTGC
ACGAGCAAACTCTAGTAGTTGACCAGAAAATGAAGGCCCTGAAGAATGAG
CTGGAGCAGGCCAAACCATTTCAGATTGAGAGGGTTAAGGAGATGCGTTA
TCATGGAGTGCGTTATCGCATTTTAGCCAGCTCGACCGGATGCACTAAGA
CCTATCCCGAGTACATAAGCCGGATGACCGAAGAGCGGGCCCTTTGCGAG
TTTCAGAGAGCCTACAATATCGTCAATCAGTCAAACACCGATTTGAGCAA
TTTATACCTGGACATGAGTGAGTCAAAAAAGGAGCTAGATCAACGCGTAG
CCAGGTTGGACCGGTCTTTAGGAAGTACATTCTTGAAAGAGCTAGATTCG
GTGCTGCAAATAATCGAGGACTTAAACACGTATTTTTTTGGCGTGATCGT
GAAGCTAAAGACGTGGGCGGAGCTGATGGACCCTATGAAAGAGCACTCTA
TAGAGGACTATCTGGGGCTATTGAGTCAGGAAACAGACTTCCGGACTTTC
ATGAGTGCCGGCATGGAAAACTGCACCTGCAAGCGTTGCGACAAGAAGGA
TCCCTTGAAGCCGTACCTTCCGTGCTGGTGTCAAATGGAATCTAGCGAGG
ATGTTACAAATCTTAAGAATTTTGACGACGATTGTCCAAAGAACATAGCT
GGCATCACGCAACACGAAAGTGACATTGTGACACCTAGTGACACCTCCTT
GTTAGTGAGGGCAGCGGATGAAAAGGCAAGGCTTGCGATGAATCAGGCGG
AATAAAAGCTTTCTAGACCAT

BS23044.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:03:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG13843-RA 1089 CG13843-PA 1..1089 17..1105 5310 99.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:03:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG13843-RA 1183 CG13843-RA 54..1143 17..1106 5315 99.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:03:42
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22609538..22610106 17..585 2830 99.8 Plus
3R 32079331 3R 22610155..22610675 586..1106 2485 98.5 Plus
Blast to na_te.dros performed on 2014-11-26 22:03:42 has no hits.

BS23044.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-02 09:57:09 Download gff for BS23044.complete
Subject Subject Range Query Range Percent Splice Strand
CG13843-RA 54..1140 17..1103 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:45:22 Download gff for BS23044.complete
Subject Subject Range Query Range Percent Splice Strand
CG13843-RA 54..1140 17..1103 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:50:03 Download gff for BS23044.complete
Subject Subject Range Query Range Percent Splice Strand
CG13843-RA 54..1140 17..1103 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:50:03 Download gff for BS23044.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22609538..22610106 17..585 99 -> Plus
3R 22610155..22610672 586..1103 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:45:22 Download gff for BS23044.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18435260..18435828 17..585 99 -> Plus
arm_3R 18435877..18436394 586..1103 98   Plus

BS23044.pep Sequence

Translation from 16 to 1104

> BS23044.pep
MIAKLKQEYAERWHYPPIVPPAKLRYVACGKVAFYGHNDKPKYKPCWQHP
LNVQDQTRFGVCWEYPPERYKRRPLPPPCRGSTIPIHLLKPTFKHCENIY
SRYDFKLEQCVHEQTLVVDQKMKALKNELEQAKPFQIERVKEMRYHGVRY
RILASSTGCTKTYPEYISRMTEERALCEFQRAYNIVNQSNTDLSNLYLDM
SESKKELDQRVARLDRSLGSTFLKELDSVLQIIEDLNTYFFGVIVKLKTW
AELMDPMKEHSIEDYLGLLSQETDFRTFMSAGMENCTCKRCDKKDPLKPY
LPCWCQMESSEDVTNLKNFDDDCPKNIAGITQHESDIVTPSDTSLLVRAA
DEKARLAMNQAE*

BS23044.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:01:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG13843-PA 362 CG13843-PA 1..362 1..362 1958 100 Plus