BS23047.complete Sequence
782 bp assembled on 2011-02-02
GenBank Submission: KX806388
> BS23047.complete
GAAGTTATCAGTCGACATGGTGGTTACTCGCAGTGCAGCTACGAAGAAGC
AGAACCAAGTGCTGACCTTATCTGACCAGAACATCCTAGCAGAATCTTCG
AGGACCAAAGGACCTCCTGTGCCCAAGAAGAATGTTAAGAAATTGCCGAC
TGCACGTCAGTGTGTCAAGGTGGCTGCAAATCTTCTAGACGCACAAGAAC
CTAACGAAAATGAAAACACAGGAACCCAAAGGAAGGATGGAAAGCAACTG
GATTCCAAATTGAGTTCCACAGTCCAAAATACAGAAGCAGCGAGGTCCAA
AGAAACTCCTGCACCCAAGAAGAATGTTAAGAAACTGCAGGCTGCACTTC
CGTGCGCCGACGCGGCTGCAAATCTTTTGGAGGAACAAGCATCTAATGAA
ATGAATGAAGAAGGACCTCCTGTGCCCAAGAAAAATGTGAAGAAACTTCC
GGCTGCACGTCAGTGTGTCAAGGTGGCTGCAAATCTTCTAGACGCACAAG
AATCTATCGAAAATGAAAAAACAGGAACAAAAAGGAAGGATGGGAAGCAA
CTGCAGGCACAAAATTCGAATGAAAATGAAAAAACAAGCACATTAAAGAA
GGATAAAAAACTACTGGCTTCCAAAACTCCAGAAGCAGCGACAAACGATA
ATGCAAATCCAAATATGAAACCAAGCCTAAAGAAGTCGACAAGGGAGCAC
AAGTCCAAAAAGTGTAATGACATTCAAAAAGCTGGAAAAGATCACATCGA
ACATCAAGCCGAATAAAAGCTTTCTAGACCAT
BS23047.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:03:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31406-RB | 750 | CG31406-PB | 1..750 | 17..766 | 3750 | 100 | Plus |
CG31406-RA | 447 | CG31406-PA | 92..447 | 411..766 | 1675 | 98 | Plus |
CG31406-RA | 447 | CG31406-PA | 1..234 | 17..250 | 1110 | 98.3 | Plus |
CG31406-RB | 750 | CG31406-PB | 92..234 | 411..553 | 550 | 92.3 | Plus |
CG31406-RB | 750 | CG31406-PB | 395..537 | 108..250 | 550 | 92.3 | Plus |
CG31406-RB | 750 | CG31406-PB | 83..193 | 291..401 | 225 | 80.2 | Plus |
CG31406-RB | 750 | CG31406-PB | 275..385 | 99..209 | 225 | 80.2 | Plus |
CG31406-RA | 447 | CG31406-PA | 83..193 | 291..401 | 225 | 80.2 | Plus |
CG31406-RB | 750 | CG31406-PB | 290..379 | 417..506 | 180 | 80 | Plus |
CG31406-RB | 750 | CG31406-PB | 401..490 | 306..395 | 180 | 80 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:03:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31406-RB | 1010 | CG31406-RB | 160..909 | 17..766 | 3750 | 100 | Plus |
CG31406-RA | 636 | CG31406-RA | 180..535 | 411..766 | 1675 | 98 | Plus |
CG31406-RA | 636 | CG31406-RA | 89..322 | 17..250 | 1110 | 98.3 | Plus |
CG31406-RB | 1010 | CG31406-RB | 251..393 | 411..553 | 550 | 92.3 | Plus |
CG31406-RB | 1010 | CG31406-RB | 554..696 | 108..250 | 550 | 92.3 | Plus |
CG31406-RB | 1010 | CG31406-RB | 242..352 | 291..401 | 225 | 80.2 | Plus |
CG31406-RB | 1010 | CG31406-RB | 434..544 | 99..209 | 225 | 80.2 | Plus |
CG31406-RA | 636 | CG31406-RA | 171..281 | 291..401 | 225 | 80.2 | Plus |
CG31406-RB | 1010 | CG31406-RB | 449..538 | 417..506 | 180 | 80 | Plus |
CG31406-RB | 1010 | CG31406-RB | 560..649 | 306..395 | 180 | 80 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:03:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10349180..10349482 | 215..517 | 1515 | 100 | Plus |
3R | 32079331 | 3R | 10348920..10349117 | 17..214 | 990 | 100 | Plus |
3R | 32079331 | 3R | 10349796..10349909 | 653..766 | 570 | 100 | Plus |
3R | 32079331 | 3R | 10349011..10349117 | 411..517 | 430 | 93.5 | Plus |
3R | 32079331 | 3R | 10349376..10349482 | 108..214 | 430 | 93.5 | Plus |
3R | 32079331 | 3R | 10349668..10349744 | 581..657 | 370 | 98.7 | Plus |
3R | 32079331 | 3R | 10349545..10349607 | 518..580 | 315 | 100 | Plus |
3R | 32079331 | 3R | 10349002..10349112 | 291..401 | 225 | 80.2 | Plus |
3R | 32079331 | 3R | 10349256..10349366 | 99..209 | 225 | 80.2 | Plus |
3R | 32079331 | 3R | 10349271..10349360 | 417..506 | 180 | 80 | Plus |
3R | 32079331 | 3R | 10349382..10349471 | 306..395 | 180 | 80 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:03:27 has no hits.
BS23047.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-02 09:57:08 Download gff for
BS23047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31406-RB | 89..836 | 17..764 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:45:13 Download gff for
BS23047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31406-RB | 160..907 | 17..764 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:49:54 Download gff for
BS23047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31406-RB | 160..907 | 17..764 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:49:54 Download gff for
BS23047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10348920..10349117 | 17..214 | 100 | -> | Plus |
3R | 10349180..10349482 | 215..517 | 100 | -> | Plus |
3R | 10349545..10349607 | 518..580 | 100 | -> | Plus |
3R | 10349668..10349739 | 581..652 | 100 | -> | Plus |
3R | 10349796..10349907 | 653..764 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:45:13 Download gff for
BS23047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6174642..6174839 | 17..214 | 100 | -> | Plus |
arm_3R | 6174902..6175204 | 215..517 | 100 | -> | Plus |
arm_3R | 6175267..6175329 | 518..580 | 100 | -> | Plus |
arm_3R | 6175390..6175461 | 581..652 | 100 | -> | Plus |
arm_3R | 6175518..6175629 | 653..764 | 100 | | Plus |
BS23047.pep Sequence
Translation from 16 to 765
> BS23047.pep
MVVTRSAATKKQNQVLTLSDQNILAESSRTKGPPVPKKNVKKLPTARQCV
KVAANLLDAQEPNENENTGTQRKDGKQLDSKLSSTVQNTEAARSKETPAP
KKNVKKLQAALPCADAAANLLEEQASNEMNEEGPPVPKKNVKKLPAARQC
VKVAANLLDAQESIENEKTGTKRKDGKQLQAQNSNENEKTSTLKKDKKLL
ASKTPEAATNDNANPNMKPSLKKSTREHKSKKCNDIQKAGKDHIEHQAE*
BS23047.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:00:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31406-PB | 249 | CG31406-PB | 1..249 | 1..249 | 1259 | 100 | Plus |
CG31406-PA | 148 | CG31406-PA | 10..148 | 105..249 | 591 | 83.4 | Plus |
CG31406-PA | 148 | CG31406-PA | 1..109 | 1..119 | 394 | 72.3 | Plus |