Clone BS23047 Report

Search the DGRC for BS23047

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:230
Well:47
Vector:pDNR-Dual
Associated Gene/TranscriptCG31406-RB
Protein status:BS23047.pep: full length peptide match
Sequenced Size:782

Clone Sequence Records

BS23047.complete Sequence

782 bp assembled on 2011-02-02

GenBank Submission: KX806388

> BS23047.complete
GAAGTTATCAGTCGACATGGTGGTTACTCGCAGTGCAGCTACGAAGAAGC
AGAACCAAGTGCTGACCTTATCTGACCAGAACATCCTAGCAGAATCTTCG
AGGACCAAAGGACCTCCTGTGCCCAAGAAGAATGTTAAGAAATTGCCGAC
TGCACGTCAGTGTGTCAAGGTGGCTGCAAATCTTCTAGACGCACAAGAAC
CTAACGAAAATGAAAACACAGGAACCCAAAGGAAGGATGGAAAGCAACTG
GATTCCAAATTGAGTTCCACAGTCCAAAATACAGAAGCAGCGAGGTCCAA
AGAAACTCCTGCACCCAAGAAGAATGTTAAGAAACTGCAGGCTGCACTTC
CGTGCGCCGACGCGGCTGCAAATCTTTTGGAGGAACAAGCATCTAATGAA
ATGAATGAAGAAGGACCTCCTGTGCCCAAGAAAAATGTGAAGAAACTTCC
GGCTGCACGTCAGTGTGTCAAGGTGGCTGCAAATCTTCTAGACGCACAAG
AATCTATCGAAAATGAAAAAACAGGAACAAAAAGGAAGGATGGGAAGCAA
CTGCAGGCACAAAATTCGAATGAAAATGAAAAAACAAGCACATTAAAGAA
GGATAAAAAACTACTGGCTTCCAAAACTCCAGAAGCAGCGACAAACGATA
ATGCAAATCCAAATATGAAACCAAGCCTAAAGAAGTCGACAAGGGAGCAC
AAGTCCAAAAAGTGTAATGACATTCAAAAAGCTGGAAAAGATCACATCGA
ACATCAAGCCGAATAAAAGCTTTCTAGACCAT

BS23047.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:03:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG31406-RB 750 CG31406-PB 1..750 17..766 3750 100 Plus
CG31406-RA 447 CG31406-PA 92..447 411..766 1675 98 Plus
CG31406-RA 447 CG31406-PA 1..234 17..250 1110 98.3 Plus
CG31406-RB 750 CG31406-PB 92..234 411..553 550 92.3 Plus
CG31406-RB 750 CG31406-PB 395..537 108..250 550 92.3 Plus
CG31406-RB 750 CG31406-PB 83..193 291..401 225 80.2 Plus
CG31406-RB 750 CG31406-PB 275..385 99..209 225 80.2 Plus
CG31406-RA 447 CG31406-PA 83..193 291..401 225 80.2 Plus
CG31406-RB 750 CG31406-PB 290..379 417..506 180 80 Plus
CG31406-RB 750 CG31406-PB 401..490 306..395 180 80 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:03:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG31406-RB 1010 CG31406-RB 160..909 17..766 3750 100 Plus
CG31406-RA 636 CG31406-RA 180..535 411..766 1675 98 Plus
CG31406-RA 636 CG31406-RA 89..322 17..250 1110 98.3 Plus
CG31406-RB 1010 CG31406-RB 251..393 411..553 550 92.3 Plus
CG31406-RB 1010 CG31406-RB 554..696 108..250 550 92.3 Plus
CG31406-RB 1010 CG31406-RB 242..352 291..401 225 80.2 Plus
CG31406-RB 1010 CG31406-RB 434..544 99..209 225 80.2 Plus
CG31406-RA 636 CG31406-RA 171..281 291..401 225 80.2 Plus
CG31406-RB 1010 CG31406-RB 449..538 417..506 180 80 Plus
CG31406-RB 1010 CG31406-RB 560..649 306..395 180 80 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:03:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10349180..10349482 215..517 1515 100 Plus
3R 32079331 3R 10348920..10349117 17..214 990 100 Plus
3R 32079331 3R 10349796..10349909 653..766 570 100 Plus
3R 32079331 3R 10349011..10349117 411..517 430 93.5 Plus
3R 32079331 3R 10349376..10349482 108..214 430 93.5 Plus
3R 32079331 3R 10349668..10349744 581..657 370 98.7 Plus
3R 32079331 3R 10349545..10349607 518..580 315 100 Plus
3R 32079331 3R 10349002..10349112 291..401 225 80.2 Plus
3R 32079331 3R 10349256..10349366 99..209 225 80.2 Plus
3R 32079331 3R 10349271..10349360 417..506 180 80 Plus
3R 32079331 3R 10349382..10349471 306..395 180 80 Plus
Blast to na_te.dros performed on 2014-11-26 22:03:27 has no hits.

BS23047.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-02 09:57:08 Download gff for BS23047.complete
Subject Subject Range Query Range Percent Splice Strand
CG31406-RB 89..836 17..764 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:45:13 Download gff for BS23047.complete
Subject Subject Range Query Range Percent Splice Strand
CG31406-RB 160..907 17..764 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:49:54 Download gff for BS23047.complete
Subject Subject Range Query Range Percent Splice Strand
CG31406-RB 160..907 17..764 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:49:54 Download gff for BS23047.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10348920..10349117 17..214 100 -> Plus
3R 10349180..10349482 215..517 100 -> Plus
3R 10349545..10349607 518..580 100 -> Plus
3R 10349668..10349739 581..652 100 -> Plus
3R 10349796..10349907 653..764 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:45:13 Download gff for BS23047.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6174642..6174839 17..214 100 -> Plus
arm_3R 6174902..6175204 215..517 100 -> Plus
arm_3R 6175267..6175329 518..580 100 -> Plus
arm_3R 6175390..6175461 581..652 100 -> Plus
arm_3R 6175518..6175629 653..764 100   Plus

BS23047.pep Sequence

Translation from 16 to 765

> BS23047.pep
MVVTRSAATKKQNQVLTLSDQNILAESSRTKGPPVPKKNVKKLPTARQCV
KVAANLLDAQEPNENENTGTQRKDGKQLDSKLSSTVQNTEAARSKETPAP
KKNVKKLQAALPCADAAANLLEEQASNEMNEEGPPVPKKNVKKLPAARQC
VKVAANLLDAQESIENEKTGTKRKDGKQLQAQNSNENEKTSTLKKDKKLL
ASKTPEAATNDNANPNMKPSLKKSTREHKSKKCNDIQKAGKDHIEHQAE*

BS23047.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:00:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG31406-PB 249 CG31406-PB 1..249 1..249 1259 100 Plus
CG31406-PA 148 CG31406-PA 10..148 105..249 591 83.4 Plus
CG31406-PA 148 CG31406-PA 1..109 1..119 394 72.3 Plus