Clone BS23049 Report

Search the DGRC for BS23049

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:230
Well:49
Vector:pDNR-Dual
Associated Gene/TranscriptCG32161-RA
Protein status:BS23049.pep: full length peptide match
Sequenced Size:719

Clone Sequence Records

BS23049.complete Sequence

719 bp assembled on 2011-02-02

GenBank Submission: KX804028

> BS23049.complete
GAAGTTATCAGTCGACATGATGACCTGCTTCCTCAGTCGCTTTCTGGGCC
TGGGCAGGTGCGGTCTGCAGGTGCTCGAAAGGCGGATGGGCCATTTCAAC
CATTGCACCTTGGCCCTGGCCACTCTCGACCTTGTCTGCATTGTTTGCCT
GCTCCATTACCAACTGGCGCGGCATGGCCGAGATCTGTTTTTTTGGTGCG
AGGAACTGGACCAACGACTAGTGGAGTACATGCTATCTGCAGTCGTATTG
ATGGCCAGCGTTAGTGTGCTGGGCTCGTGCGTGGATGGCTTTATCTTCTC
TGCCTTGGTTCAGCGGAAAATGAGTCGGTTTGATATGCCGCGACAGTATT
TTGAAGATCGTTACCGCAGATTCGTCTTCATGCGGCTGGTCAGGCAACTA
GAGCAGGCTCTCAAAGTGCAGGCTAAGCAGTCTGAGTTGGGCGAAAGAAT
GATGACGCCACTCGCCAATCTGTTCGAGGCGCAGCAGCTGATCAAGGAGG
CAATCGATGAGTTTCGCACAGCGGTGCGAGTCCTACTGTGGCCCAATCGA
TCCGATGTGCTGGCAGAGGCGTTTGTCCTCTTCCACATTAGCGAATCGCA
GTTGTCGGATCTGACACTTCAAGGCTACAGGCTGAACGACGTCGAGGGGG
AAGACATGTCCAATTCCCGTCTTAGTCAAATGCTTAACCCACTTTGGTAT
TAAAAGCTTTCTAGACCAT

BS23049.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:03:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG32161-RA 687 CG32161-PA 1..687 17..703 3405 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:03:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG32161-RA 774 CG32161-RA 71..759 17..705 3415 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:03:51
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16846297..16846985 17..705 3415 99.7 Plus
Blast to na_te.dros performed on 2014-11-26 22:03:52 has no hits.

BS23049.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-02 09:57:09 Download gff for BS23049.complete
Subject Subject Range Query Range Percent Splice Strand
CG32161-RA 71..755 17..701 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:45:28 Download gff for BS23049.complete
Subject Subject Range Query Range Percent Splice Strand
CG32161-RA 71..755 17..701 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:50:08 Download gff for BS23049.complete
Subject Subject Range Query Range Percent Splice Strand
CG32161-RA 71..755 17..701 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:50:08 Download gff for BS23049.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16846297..16846981 17..701 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:45:28 Download gff for BS23049.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16839397..16840081 17..701 99   Plus

BS23049.pep Sequence

Translation from 16 to 702

> BS23049.pep
MMTCFLSRFLGLGRCGLQVLERRMGHFNHCTLALATLDLVCIVCLLHYQL
ARHGRDLFFWCEELDQRLVEYMLSAVVLMASVSVLGSCVDGFIFSALVQR
KMSRFDMPRQYFEDRYRRFVFMRLVRQLEQALKVQAKQSELGERMMTPLA
NLFEAQQLIKEAIDEFRTAVRVLLWPNRSDVLAEAFVLFHISESQLSDLT
LQGYRLNDVEGEDMSNSRLSQMLNPLWY*

BS23049.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:01:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG32161-PA 228 CG32161-PA 1..228 1..228 1174 100 Plus