BS23053.complete Sequence
1322 bp assembled on 2011-02-02
GenBank Submission: KX803793
> BS23053.complete
GAAGTTATCAGTCGACATGCTTCCCAACAGCTTTTACAGGATGAGGGACT
TTGCCAATCCGAGAACAATGTTTAAAAGCTGTGCGAACAACAATGAATAT
CCCACACAAGGTCCCCAAAAAGTGGAGTCACCAACTGATGTTACCCAGCC
TGCTGCAGCTCCTCAATCCACTGAAGATACTCAACCAGAAAAGACCCAAG
AACCGATGAATGATCCAAACAAAACGTCGCCATCAGAGCCCCAAAAACGT
GGCAAGGGGAACCGGAAGGGCAAGAAGAATCAAAAGAATGCGCCACGCAC
TCCCAGTCAGACGAGCAAGAGCAGTCGAAGCAACAATCCGGGCAAAGATG
GAAAGTCGACGGGAAATGATGACAATGAGAAGGGTAAAGGCCAAGGAAAA
CAGATGGTCCAGCAGAAAGAAAATAGCCCTGAACAGGAGCAGTCGACTAG
TGCACAATATAGGAAGAATGTGCTCGACAAGGATCTGCAGGACAAGAAGT
TAATCGAAAAGAATATGCAGGGAAAGATAATCACACAAGAAAATCTTTTA
GGGCAGAAGGTCCTAATGCGGTTATCCGAGCAGAAGCTTTTGAGCTTGAG
GCTCGAGCCCAGGATTAAACAGAACACATGTCCACCGGCCAAAAAAGAAG
ATGCGGTGGTCGCTTTTGACAATTCACTAGAATTTCTGTCACTGAACAAT
AAATGTGATGATGATCTGACCATCGCGGCGGAGAACGCCGAACTTTTGGA
GGTCGAGGATCCTCAACATCCACTCAACAACTGCTGGACTCTGTGGTATC
TAGAGAACGATCGAAATAAAAGTTGGGAAGAAATGCTGCACAAGGTTACA
AGCTTCGATACCGTGGAGAAGTTTTGGAGCCTGATCACTCACATCAAGCC
CCCATCCGAGCTTATGCTGGGCAGTGACTACTCCCTGTTCAAGAAGGGCA
TTCGACCCATGTGGGAGGATGAGGCCAATGTCAATGGAGGACGCTGGGTC
ATCAACTTGACCAAGAGCGCCAAGATGGCTCTGGACAGTTTCTGGATGGA
CGCCATGCTCTGTCTGATTGGAGAGGCCTGTAAGCACTCGGACGATCTTT
GTGGCGTTGTGGTCAATATTCGCGGAAAGTCGAACAAGATCTCTATTTGG
AACGCTGACGGGGGAAATCAGACTACAGTCCTTGAAATTGGACGCATTTT
ACGCAAGGTTCTACGCATGGACAACATATACGTGCTGGAGTATCAGTTGC
ACAAGGACTCCAAGGATAAACTGGGATCAACTGTGAAGAGAATATACACT
GTATAGAAGCTTTCTAGACCAT
BS23053.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:04:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF4E-7-RA | 1290 | CG32859-PA | 1..1290 | 17..1306 | 6435 | 99.9 | Plus |
| eIF-4E-RI | 780 | CG4035-PI | 258..635 | 784..1161 | 390 | 73.5 | Plus |
| eIF-4E-RH | 780 | CG4035-PH | 258..635 | 784..1161 | 390 | 73.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:04:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF4E-7-RA | 1638 | CG32859-RA | 131..1421 | 16..1306 | 6440 | 99.9 | Plus |
| eIF-4E-RI | 1793 | CG4035-RI | 1019..1396 | 784..1161 | 390 | 73.5 | Plus |
| eIF-4E-RH | 1492 | CG4035-RH | 718..1095 | 784..1161 | 390 | 73.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:04:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1158816..1160106 | 1306..16 | 6440 | 99.9 | Minus |
| 3L | 28110227 | 3L | 9400583..9400753 | 954..784 | 270 | 77.2 | Minus |
| 3L | 28110227 | 3L | 6665168..6665336 | 953..785 | 185 | 74 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:04:09 has no hits.
BS23053.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-02 09:57:10 Download gff for
BS23053.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF4E-7-RA | 133..1422 | 17..1306 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:45:41 Download gff for
BS23053.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF4E-7-RA | 132..1421 | 17..1306 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:50:19 Download gff for
BS23053.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF4E-7-RA | 132..1421 | 17..1306 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:50:19 Download gff for
BS23053.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1158816..1160105 | 17..1306 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:45:41 Download gff for
BS23053.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1052849..1054138 | 17..1306 | 99 | | Minus |
BS23053.pep Sequence
Translation from 16 to 1305
> BS23053.pep
MLPNSFYRMRDFANPRTMFKSCANNNEYPTQGPQKVESPTDVTQPAAAPQ
STEDTQPEKTQEPMNDPNKTSPSEPQKRGKGNRKGKKNQKNAPRTPSQTS
KSSRSNNPGKDGKSTGNDDNEKGKGQGKQMVQQKENSPEQEQSTSAQYRK
NVLDKDLQDKKLIEKNMQGKIITQENLLGQKVLMRLSEQKLLSLRLEPRI
KQNTCPPAKKEDAVVAFDNSLEFLSLNNKCDDDLTIAAENAELLEVEDPQ
HPLNNCWTLWYLENDRNKSWEEMLHKVTSFDTVEKFWSLITHIKPPSELM
LGSDYSLFKKGIRPMWEDEANVNGGRWVINLTKSAKMALDSFWMDAMLCL
IGEACKHSDDLCGVVVNIRGKSNKISIWNADGGNQTTVLEIGRILRKVLR
MDNIYVLEYQLHKDSKDKLGSTVKRIYTV*
BS23053.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:01:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF4E-7-PA | 429 | CG32859-PA | 1..429 | 1..429 | 2270 | 100 | Plus |
| eIF-4E-PC | 248 | CG4035-PC | 69..248 | 250..429 | 672 | 67.8 | Plus |
| eIF-4E-PI | 259 | CG4035-PI | 80..259 | 250..429 | 672 | 67.8 | Plus |
| eIF-4E-PH | 259 | CG4035-PH | 80..259 | 250..429 | 672 | 67.8 | Plus |
| eIF-4E-PD | 259 | CG4035-PD | 80..259 | 250..429 | 672 | 67.8 | Plus |
