BS23058.complete Sequence
821 bp assembled on 2011-02-02
GenBank Submission: KX805457
> BS23058.complete
GAAGTTATCAGTCGACATGTCGAATCTGTACACCGAATTGAAGAACGAGT
GGAGCAAACATGCGCCCAACCTCACCCACTGCTCCCGCCTCCTGGATGGC
TTCAAACTGGAGCTGGTGAGGTCCAACTTTGGAACAATCCAAACTGCATC
GAGTTCCAAGCAAAAGGATCAGCTAATCAAATCGCGGGAGATGCTGGAAA
TCGCCGTGGAACATAGCATCACCATCAAGGATTATGCTGCCTTCGAGAGA
TATATGGCCCAGTTGAATACCTACTACTATGATTACGATAAGTACTTGGA
ATCATCGAAGCACATGTACAAGTTCATGGGCCTAAATCTGCTATATATGT
TGGCCACGAATCGCCTTGCCGACTTCCACATCGAACTGGAACGTTTACCG
ACGGCTTTGCTGCTCCATGATAGCTTCATCCAACCCGTTTTGGCTTTGGA
GAACTACTACATGGAGGGCAGATACAACAAGATACTGCAAGCCAAGAAAT
CTATGCCCTCGGAGATCTATTCGAATTTTATGGACATCCTGGTGAACACG
GCGCGTGAGGAGATCGCATCCTGCATGGAGAAATCCTATCTGAAGATGGC
GCCCAAACTAGCTGCTCAGCGTTTGGGCCTTCGTCCCGGTTCCAAGGAGC
TTTTCGAGCTGGCGACTAAGCGCCAGTGGTGTCTGGACGAGGAGGGGAAC
TACGACTATGCTGGACTTCATACCAGACCCATGGAGAAGGTCCCTGCCAA
GGACATCGCCACGCATAATCTCACTTATGCCCAAGAGCTGGAGAAAATAG
TTTGAAAGCTTTCTAGACCAT
BS23058.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:02:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rpn12R-RA | 789 | CG11552-PA | 1..789 | 17..805 | 3765 | 98.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:02:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rpn12R-RA | 940 | CG11552-RA | 66..856 | 16..806 | 3775 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:02:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15041715..15042505 | 806..16 | 3775 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:02:30 has no hits.
BS23058.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-02 09:57:06 Download gff for
BS23058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rpn12R-RA | 67..854 | 17..804 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:44:43 Download gff for
BS23058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rpn12R-RA | 67..854 | 17..804 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:49:29 Download gff for
BS23058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rpn12R-RA | 67..854 | 17..804 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:49:29 Download gff for
BS23058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15041717..15042504 | 17..804 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:44:43 Download gff for
BS23058.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15034817..15035604 | 17..804 | 98 | | Minus |
BS23058.pep Sequence
Translation from 16 to 804
> BS23058.pep
MSNLYTELKNEWSKHAPNLTHCSRLLDGFKLELVRSNFGTIQTASSSKQK
DQLIKSREMLEIAVEHSITIKDYAAFERYMAQLNTYYYDYDKYLESSKHM
YKFMGLNLLYMLATNRLADFHIELERLPTALLLHDSFIQPVLALENYYME
GRYNKILQAKKSMPSEIYSNFMDILVNTAREEIASCMEKSYLKMAPKLAA
QRLGLRPGSKELFELATKRQWCLDEEGNYDYAGLHTRPMEKVPAKDIATH
NLTYAQELEKIV*
BS23058.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:00:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rpn12R-PA | 262 | CG11552-PA | 1..262 | 1..262 | 1357 | 100 | Plus |
Rpn12-PA | 264 | CG4157-PA | 4..264 | 1..262 | 660 | 49.6 | Plus |