BS23074.complete Sequence
408 bp assembled on 2011-02-02
GenBank Submission: KX803994
> BS23074.complete
GAAGTTATCAGTCGACATGTGCAGCCCCTGCTGTGGATCCTGCTGCGGAC
CTTGCTGCTCCCCCTGCTGCAGCCCTTGTTGTCCACCGTGCTGCAATGAC
TGCTGCGGGTCCTGCTGCAGTCCGTGTTGCGGACCCTGTTGCAGCCCCTG
CTGCGGACCCTGCTGCAGCCCCTGCTGCAGTCCTTGCTGCACCCCCTGTT
GCACCCCTTGCTGCACGCCGTGCTGCAAGTGTTGCACACCCTGCTGCGTG
CCGTGTTGCACACCCTGCTGCACCCCCTGCTGCACTCCCTGTTGCACCCC
TTGCTGCAGTCCGTGCTGCGGTCCGTGCTGCAGCCCCTGCTGCTCTCCTT
GCGGAGGGTCAAAGTGCAAGTGAAAGCTTTCTAGACCATTCGTTTGGCGC
TCTAAATG
BS23074.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:04:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pif2-RA | 357 | CG31483-PA | 1..357 | 17..373 | 1785 | 100 | Plus |
| Pif2-RA | 357 | CG31483-PA | 95..171 | 276..352 | 190 | 83.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:04:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pif2-RA | 887 | CG31483-RA | 122..478 | 17..373 | 1785 | 100 | Plus |
| Pif2-RA | 887 | CG31483-RA | 216..292 | 276..352 | 190 | 83.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:04:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6549218..6549574 | 17..373 | 1785 | 100 | Plus |
| 3R | 32079331 | 3R | 6549312..6549388 | 276..352 | 190 | 83.1 | Plus |
Blast to na_te.dros performed 2014-11-26 22:04:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 648..736 | 277..368 | 200 | 71.7 | Plus |
BS23074.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-02 09:57:11 Download gff for
BS23074.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pif2-RA | 122..478 | 17..373 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:45:52 Download gff for
BS23074.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pif2-RA | 122..478 | 17..373 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:50:29 Download gff for
BS23074.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pif2-RA | 122..478 | 17..373 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:50:29 Download gff for
BS23074.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6549218..6549574 | 17..373 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:45:52 Download gff for
BS23074.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2374940..2375296 | 17..373 | 100 | | Plus |
BS23074.pep Sequence
Translation from 16 to 372
> BS23074.pep
MCSPCCGSCCGPCCSPCCSPCCPPCCNDCCGSCCSPCCGPCCSPCCGPCC
SPCCSPCCTPCCTPCCTPCCKCCTPCCVPCCTPCCTPCCTPCCTPCCSPC
CGPCCSPCCSPCGGSKCK*
BS23074.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:06:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pif2-PA | 118 | CG31483-PA | 1..118 | 1..118 | 864 | 100 | Plus |
| Mst84Dd-PA | 72 | CG17935-PA | 3..57 | 2..58 | 243 | 66.1 | Plus |
| Mst84Dd-PA | 72 | CG17935-PA | 7..57 | 11..62 | 241 | 68.5 | Plus |
| Mst84Dd-PA | 72 | CG17935-PA | 3..57 | 34..89 | 237 | 65.5 | Plus |
| Mst84Dd-PA | 72 | CG17935-PA | 7..57 | 31..81 | 237 | 67.9 | Plus |
| Mst84Dd-PA | 72 | CG17935-PA | 3..57 | 14..77 | 232 | 60.9 | Plus |
| Mst98Ca-PA | 334 | CG11719-PA | 172..320 | 2..113 | 227 | 40.7 | Plus |
| Mst84Dd-PA | 72 | CG17935-PA | 8..59 | 64..115 | 224 | 64.8 | Plus |
| Mst84Dd-PA | 72 | CG17935-PA | 3..57 | 42..109 | 214 | 55.7 | Plus |
| Mst84Db-PA | 74 | CG17934-PA | 2..73 | 37..113 | 207 | 50.6 | Plus |
| Mst98Ca-PA | 334 | CG11719-PA | 210..331 | 2..115 | 198 | 40.6 | Plus |
| Mst84Dc-PB | 55 | CG17945-PB | 1..53 | 1..49 | 193 | 61.8 | Plus |
| Mst98Ca-PA | 334 | CG11719-PA | 169..304 | 19..112 | 188 | 37.5 | Plus |
| Mst84Db-PA | 74 | CG17934-PA | 12..73 | 2..47 | 174 | 55.6 | Plus |
| Mst98Ca-PA | 334 | CG11719-PA | 157..285 | 17..113 | 168 | 37.6 | Plus |
| Mst84Db-PA | 74 | CG17934-PA | 2..54 | 65..114 | 136 | 51.8 | Plus |
| Mst84Dd-PA | 72 | CG17935-PA | 8..33 | 91..117 | 132 | 70.4 | Plus |
