BS23108.complete Sequence
899 bp assembled on 2011-02-07
GenBank Submission: KX802122
> BS23108.complete
GAAGTTATCAGTCGACATGAATATTTTACCAAAAAAACGCTGGCATGTGC
GTACCAAGGAGAACATTGCCCGCGTGCGCCGGGATCAAGCGGCTGCCGCA
GCAGAAGAAAAAGTCCGGCAGGAGAAATTGGAATTTGCTGAAAGCGAGGC
ACGAATCAACTTCCTGCGCCGCCAATCGGGCTTGCCGGAGAAGGCCTCCA
AGGAATCTCGAGAGGAGTCGCAATGCAGTACTGAAACAACCAAAGGGGTG
GATCTCTTTGCCGACTACAAGGCGAGAGTGAAGACCACTAACAAAGACTT
GGAAAAGGAGCAAAAGGAGGAGCAGGAGAAGTATGAGAAGCAGATCGGCT
ACCTCACCTACTTGGGCCAGGACACCAATGAAGCTTTGAAAGTGCGCAGC
TGGTACGAGTTAGCCCCCAAAAGACCAGAAGTTGGGGATCCCACAGCTAC
TGAAACTCATCATAAGCAAAAGCTAGCCCACGATCCTCTGACCCTAATTA
ATGCTTTGTTGCCGCCAGAAAAAAAGGATCCCAAAAAGGCCACAAAAAGA
ATTCGCGAAAGGACACCCGCGCCTTCTCAGGAACCTTCAATACCCCACAA
GGACAAGAAATCCAAGAAAGATAAGAAGAAGCACAAGAGCAAAAATGGTT
CAAGGGAGACCCTTTTGGCCGAGGAACGCATAAAACGAGAAAAGCTCGAG
ACGCTAAGAAGGGAGCGCATGCGACGGGAAACAGCGGAACGCCAGCGTTC
CGAGGCTCTGTTCGCACCCAAGGAGCTGCCGGTGGCTGCCAGTGCCGAAT
CCACGCCGGCTTCGACGCCTAAGGTTGTCCAAAAGTACAACAGTCAGTTT
AATCCGGAGTTAGCAAAGCAAAATATGCTCTAGAAGCTTTCTAGACCAT
BS23108.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:10:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12818-RA | 867 | CG12818-PA | 1..867 | 17..883 | 4335 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:10:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12818-RA | 1001 | CG12818-RA | 39..905 | 17..883 | 4335 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:10:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10331856..10332599 | 140..883 | 3720 | 100 | Plus |
3R | 32079331 | 3R | 10331697..10331798 | 39..140 | 510 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:10:23 has no hits.
BS23108.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-07 10:59:35 Download gff for
BS23108.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12818-RA | 39..905 | 17..883 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:49:15 Download gff for
BS23108.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12818-RA | 39..905 | 17..883 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:53:18 Download gff for
BS23108.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12818-RA | 39..905 | 17..883 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:53:18 Download gff for
BS23108.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10331619..10331641 | 17..39 | 100 | -> | Plus |
3R | 10331698..10331797 | 40..139 | 100 | -> | Plus |
3R | 10331856..10332599 | 140..883 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:49:15 Download gff for
BS23108.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6157420..6157519 | 40..139 | 100 | -> | Plus |
arm_3R | 6157341..6157363 | 17..39 | 100 | -> | Plus |
arm_3R | 6157578..6158321 | 140..883 | 100 | | Plus |
BS23108.pep Sequence
Translation from 16 to 882
> BS23108.pep
MNILPKKRWHVRTKENIARVRRDQAAAAAEEKVRQEKLEFAESEARINFL
RRQSGLPEKASKESREESQCSTETTKGVDLFADYKARVKTTNKDLEKEQK
EEQEKYEKQIGYLTYLGQDTNEALKVRSWYELAPKRPEVGDPTATETHHK
QKLAHDPLTLINALLPPEKKDPKKATKRIRERTPAPSQEPSIPHKDKKSK
KDKKKHKSKNGSRETLLAEERIKREKLETLRRERMRRETAERQRSEALFA
PKELPVAASAESTPASTPKVVQKYNSQFNPELAKQNML*
BS23108.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:01:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12818-PA | 288 | CG12818-PA | 1..288 | 1..288 | 1468 | 100 | Plus |