BS23115.complete Sequence
1082 bp assembled on 2011-02-07
GenBank Submission: KX802753
> BS23115.complete
GAAGTTATCAGTCGACATGTCCAGCGACGACAATAGTAGTGATAGCAATT
CGTCCAGCGATGAAAGGCAAAGGAAACGGAAGCTTAAGAAGCACAGCAAA
GATGTGGACAAGTCCAAAAAGAAGAAGTCGAAAAAGCACAAGAAAGAAAA
GCGTCGCCACAAGGAGAAGAAACGCAGCAAGCATGAGGAGGAGCCACCTG
TGCCTTACACGCAACCTCCACATTTAATTAATGCATCTCCGCCAGATGTG
GCTACAAACAACGAAGATTCCTTTGGTCCCGCTTTACCGCCGCATTTAAG
GAAGACCCAGCAGCCGGAACTCCCTGAGCAAAGCCAACCAGCCCCACAAC
CGCAGGCCATGATAGGACCCGTCCTGCCCAGCAATTTGACCCGGGAAAAG
TCTCCTACTAAGGAAGCGGAAGCTGAGGACGATGATGACCTAGCTGGCAC
CTTTGGTCCTCTGCCAAATGCCAGTCAAGTGGCTCTGGAGGAACGTGCTT
TGGCACTTAAACTGGCAGCTCTGGAGGGCGGGGGATTGGGTACATCTACA
GACCAAGATGTCCGCGAAGAGTGGATGCTTGAGCTGCCAGATGTGGGACT
GAAGAGCGGCCTTGCCGCCCTGAGCAATATGAAGCGCACTTTCTATCAGG
GAAAAGAGCGACCCGACTTTAGCGATCGATCATCCTGGACGAAGACCCCG
CAGAGTGAAGCGGATGCTGCTGCATCGGGCCCAAAGTCGCTCAGTTCGAA
GGAACTCGAGCAAATGGCACAGGTCAAGTACGAACAGCAGCGGGATGACG
AGCAGGAGAGCATGGCCAAGAGGCACAAAAAGAAGCACAAGCGAGAGGAG
TCCCTAGTGGAGCTACATCAAAAAAAGCTTAGGAAAGAGCAGAGAGAAAA
GGAAAAAGAACTGGCTGCATCGGGTTCCAAGCCAGAACGAAGACCTTTTA
GTAGGGATGTGGACTTGAAACTTAACAAGATCGACAAGAATCAGACCAAG
CAGATTGTAGACAAGGCCAAGATATTGAACACCAAGTTCTCCAGGGGTCA
AGCTAAGTATCTGTAGAAGCTTTCTAGACCAT
BS23115.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:21:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33332-RA | 1050 | CG33332-PA | 1..1050 | 17..1066 | 5250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:21:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33332-RA | 1315 | CG33332-RA | 78..1128 | 16..1066 | 5255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:21:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14887849..14888735 | 16..902 | 4435 | 100 | Plus |
| 3R | 32079331 | 3R | 14888792..14888959 | 899..1066 | 840 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:21:21 has no hits.
BS23115.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-07 14:43:02 Download gff for
BS23115.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33332-RA | 58..1107 | 17..1066 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:55:13 Download gff for
BS23115.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33332-RA | 58..1107 | 17..1066 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:58:31 Download gff for
BS23115.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33332-RA | 79..1128 | 17..1066 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:58:31 Download gff for
BS23115.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14887850..14888734 | 17..901 | 100 | -> | Plus |
| 3R | 14888795..14888959 | 902..1066 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:55:13 Download gff for
BS23115.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10713572..10714456 | 17..901 | 100 | -> | Plus |
| arm_3R | 10714517..10714681 | 902..1066 | 100 | | Plus |
BS23115.pep Sequence
Translation from 16 to 1065
> BS23115.pep
MSSDDNSSDSNSSSDERQRKRKLKKHSKDVDKSKKKKSKKHKKEKRRHKE
KKRSKHEEEPPVPYTQPPHLINASPPDVATNNEDSFGPALPPHLRKTQQP
ELPEQSQPAPQPQAMIGPVLPSNLTREKSPTKEAEAEDDDDLAGTFGPLP
NASQVALEERALALKLAALEGGGLGTSTDQDVREEWMLELPDVGLKSGLA
ALSNMKRTFYQGKERPDFSDRSSWTKTPQSEADAAASGPKSLSSKELEQM
AQVKYEQQRDDEQESMAKRHKKKHKREESLVELHQKKLRKEQREKEKELA
ASGSKPERRPFSRDVDLKLNKIDKNQTKQIVDKAKILNTKFSRGQAKYL*
BS23115.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:04:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33332-PA | 349 | CG33332-PA | 1..349 | 1..349 | 1792 | 100 | Plus |
