BS23117.complete Sequence
701 bp assembled on 2011-01-25
GenBank Submission: KX802607
> BS23117.complete
GAAGTTATCAGTCGACATGTCCTACCAGAACTGGCTAAACTACCTGCAGG
CGGCGGAGAAGAACTCCATGATAAGTGGCCGCGCCCGCAAGGTGCTCTAC
AAATTCCCGGACGGCAGGCAAATGGCCGAGGAGTACAACATGGACACGGG
AATCGTGCAGCGGCGGGCCTGGAAATCGAAGAGCAACAAGATCATGGGCG
AGTCGGAGTGGGAAATCGAGCTGGGCGATGAGCCGCGTCAGTTAAACTGG
TCGGGCAACAAGCCACCAGGATCTGGCGAGGAAACGGACTCCCTGGCCGG
CGGAGATTTCACCCTGCGGGAGAGCAACACCGCGCCACTGCTGACCAAGC
GGATCACCAAGAAGAACATTGAGTGGCGCATCCGCAACATGCCCTACTCC
CTGGACACATACAGCGTAACCGCCGATCCCGAGAAGCGTGCCATAGTCGT
GCGCACCTCGAACAAGAAGTACTACAAGGTCATCCCGGTCCCGGAACTGG
ACCGCTGTGGGGTCAAGCCCGCGCAGGAGAGCCTCTCTGTCCACCACCAG
TTCAACACGCTGATCATTACCTACCAGAAACCAGATATCCTCTGCGAGAT
GGAGGCACAGGTGCTGCTTCTGCTCAAGAATGTCGACACCGAAACCGACA
TGGATGATCTGCTGAAGGGTCTGATGGCCAAATAAAAGCTTTCTAGACCA
T
BS23117.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:26:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13901-RB | 669 | CG13901-PB | 1..669 | 17..685 | 3345 | 100 | Plus |
CG13901-RA | 669 | CG13901-PA | 1..669 | 17..685 | 3345 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:26:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13901-RB | 919 | CG13901-RB | 135..804 | 17..686 | 3350 | 100 | Plus |
CG13901-RA | 911 | CG13901-RA | 127..796 | 17..686 | 3350 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:26:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 836782..837451 | 686..17 | 3350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:26:25 has no hits.
BS23117.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:06 Download gff for
BS23117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13901-RA | 64..730 | 17..683 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:56:45 Download gff for
BS23117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13901-RA | 127..793 | 17..683 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:20 Download gff for
BS23117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13901-RA | 127..793 | 17..683 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:20 Download gff for
BS23117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 836785..837451 | 17..683 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:56:45 Download gff for
BS23117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 836785..837451 | 17..683 | 100 | | Minus |
BS23117.pep Sequence
Translation from 16 to 684
> BS23117.pep
MSYQNWLNYLQAAEKNSMISGRARKVLYKFPDGRQMAEEYNMDTGIVQRR
AWKSKSNKIMGESEWEIELGDEPRQLNWSGNKPPGSGEETDSLAGGDFTL
RESNTAPLLTKRITKKNIEWRIRNMPYSLDTYSVTADPEKRAIVVRTSNK
KYYKVIPVPELDRCGVKPAQESLSVHHQFNTLIITYQKPDILCEMEAQVL
LLLKNVDTETDMDDLLKGLMAK*
BS23117.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:12:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13901-PB | 222 | CG13901-PB | 1..222 | 1..222 | 1164 | 100 | Plus |
CG13901-PA | 222 | CG13901-PA | 1..222 | 1..222 | 1164 | 100 | Plus |