BS23119.complete Sequence
356 bp assembled on 2011-01-25
GenBank Submission: KX800730
> BS23119.complete
GAAGTTATCAGTCGACATGTTCGTTGTACGTCGTAGCGCATCTCGTCTGT
ACCCCGCTGGAGTCCAGCTGGCCAAGATGAGCGGCAGCCAGGTGGGCGAC
CTAGGCAGTGGCGCCGGCAAGGGAGGCGGCGGCGGTGGCTCTATCCGCGA
GGCCGGCGGAGCCTTCGGCAAGCTTGAGGCTGCCCGCGAGGAGGAGTACT
TCTACAAGAAGCAAAGGGAGCAGCTGGATCGCCTTAAGAACGACCAGATC
CACCAGGCTGAGTTCCACCACCAGCAGATCAAGGAGCACGAGGAGGCCAT
CCAGCGCCACAAGGAGTTCCTCGAGAACCTGCACAAGTGAAAGCTTTCTA
GACCAT
BS23119.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:26:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13551-RB | 324 | CG13551-PB | 1..324 | 17..340 | 1620 | 100 | Plus |
| CG13551-RA | 324 | CG13551-PA | 1..324 | 17..340 | 1620 | 100 | Plus |
| CG34423-RB | 258 | CG34423-PB | 82..204 | 104..226 | 315 | 83.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:26:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13551-RB | 637 | CG13551-RB | 131..454 | 17..340 | 1620 | 100 | Plus |
| CG13551-RA | 592 | CG13551-RA | 86..409 | 17..340 | 1620 | 100 | Plus |
| CG34423-RB | 468 | CG34423-RB | 188..310 | 104..226 | 315 | 83.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:26:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23382615..23382759 | 211..67 | 725 | 100 | Minus |
| 2R | 25286936 | 2R | 23378049..23378179 | 340..210 | 655 | 100 | Minus |
| 2R | 25286936 | 2R | 23358864..23358968 | 104..208 | 270 | 83.8 | Plus |
| 2R | 25286936 | 2R | 23383047..23383097 | 67..17 | 255 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:26:31 has no hits.
BS23119.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:06 Download gff for
BS23119.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13551-RA | 88..405 | 22..339 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:56:47 Download gff for
BS23119.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13551-RA | 91..408 | 22..339 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:22 Download gff for
BS23119.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13551-RA | 91..408 | 22..339 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:22 Download gff for
BS23119.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23382615..23382759 | 67..211 | 100 | <- | Minus |
| 2R | 23383048..23383092 | 22..66 | 100 | | Minus |
| 2R | 23378050..23378177 | 212..339 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:56:47 Download gff for
BS23119.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19265573..19265700 | 212..339 | 100 | <- | Minus |
| arm_2R | 19270138..19270282 | 67..211 | 100 | <- | Minus |
| arm_2R | 19270571..19270615 | 22..66 | 100 | | Minus |
BS23119.pep Sequence
Translation from 16 to 339
> BS23119.pep
MFVVRRSASRLYPAGVQLAKMSGSQVGDLGSGAGKGGGGGGSIREAGGAF
GKLEAAREEEYFYKKQREQLDRLKNDQIHQAEFHHQQIKEHEEAIQRHKE
FLENLHK*
BS23119.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:12:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13551-PB | 107 | CG13551-PB | 1..107 | 1..107 | 554 | 100 | Plus |
| CG13551-PA | 107 | CG13551-PA | 1..107 | 1..107 | 554 | 100 | Plus |
| CG34423-PB | 85 | CG34423-PB | 1..72 | 1..74 | 260 | 68.9 | Plus |
| CG34423-PA | 65 | CG34423-PA | 2..52 | 24..74 | 224 | 80.4 | Plus |
