BS23123.complete Sequence
695 bp assembled on 2011-01-25
GenBank Submission: KX802709
> BS23123.complete
GAAGTTATCAGTCGACATGGGAAAACTTACGCTTTACGGAATCGACGGTA
GTCCTCCGGTCCGTTCGGTGCTGCTCACGCTGAGAGCCTTGAATTTGGAC
TTCGACTACAAGATCGTCAATCTGATGGAGAAGGAGCACCTGAAGCCAGA
GTTCCTCAAGATCAATCCCCTGCACACCGTGCCCGCTCTGGATGATAATG
GTTTCTATTTGGCCGACAGCCATGCTATTAACTCCTACCTGGTGAGCAAG
TACGGCCGGAATGATTCTCTATACCCCAAGGATCTGAAGAAGCGAGCCAT
TGTCGATCAGCGTCTGCACTACGACTCCAGCGTGGTGACCTCGACAGGAA
GGGCTATCACCTTTCCGCTCTTCTGGGAGAACAAGACGGAGATTCCACAG
GCGAGGATCGATGCCCTGGAGGGTGTTTACAAGTCCCTCAATCTGTTTCT
GGAGAATGGCAATTATCTGGCCGGCGACAACCTGACCATTGCCGATTTCC
ACGTCATCGCCGGCTTGACAGGATTTTTCGTGTTCCTGCCTGTAGATGCC
ACTAAGTATCCCGAGCTGGCTGCCTGGATCAAGCGCATCAAGGAGCTGCC
ATACTACGAGGAAGCGAATGGCTCTCGTGCTGCCCAAATCATCGAGTTCA
TCAAGAGCAAAAAGTTCACTATTGTTTAAAAGCTTTCTAGACCAT
BS23123.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:26:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstE3-RA | 663 | CG17524-PA | 1..663 | 17..679 | 3300 | 99.8 | Plus |
| GstD1-RB | 630 | CG10045-PB | 112..169 | 134..191 | 185 | 87.9 | Plus |
| GstD1-RA | 630 | CG10045-PA | 112..169 | 134..191 | 185 | 87.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:26:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstE3-RA | 755 | CG17524-RA | 42..707 | 14..679 | 3315 | 99.8 | Plus |
| GstD1-RB | 843 | CG10045-RB | 200..257 | 134..191 | 185 | 87.9 | Plus |
| GstD1-RA | 825 | CG10045-RA | 182..239 | 134..191 | 185 | 87.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:26:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18400754..18401419 | 14..679 | 3315 | 99.8 | Plus |
| 3R | 32079331 | 3R | 12368403..12368460 | 191..134 | 185 | 87.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:26:10 has no hits.
BS23123.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:04 Download gff for
BS23123.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE3-RA | 41..701 | 17..677 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:56:39 Download gff for
BS23123.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE3-RA | 45..705 | 17..677 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:14 Download gff for
BS23123.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE3-RA | 45..705 | 17..677 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:14 Download gff for
BS23123.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18400757..18401417 | 17..677 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:56:39 Download gff for
BS23123.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14288262..14288922 | 17..677 | 99 | | Plus |
BS23123.pep Sequence
Translation from 16 to 678
> BS23123.pep
MGKLTLYGIDGSPPVRSVLLTLRALNLDFDYKIVNLMEKEHLKPEFLKIN
PLHTVPALDDNGFYLADSHAINSYLVSKYGRNDSLYPKDLKKRAIVDQRL
HYDSSVVTSTGRAITFPLFWENKTEIPQARIDALEGVYKSLNLFLENGNY
LAGDNLTIADFHVIAGLTGFFVFLPVDATKYPELAAWIKRIKELPYYEEA
NGSRAAQIIEFIKSKKFTIV*
BS23123.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:12:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstE3-PA | 220 | CG17524-PA | 1..220 | 1..220 | 1137 | 100 | Plus |
| GstE7-PA | 223 | CG17531-PA | 1..219 | 1..218 | 601 | 54.3 | Plus |
| GstE8-PB | 222 | CG17533-PB | 1..219 | 1..218 | 595 | 52.5 | Plus |
| GstE8-PA | 222 | CG17533-PA | 1..219 | 1..218 | 595 | 52.5 | Plus |
| GstE4-PA | 222 | CG17525-PA | 1..221 | 1..220 | 589 | 50.7 | Plus |
