BS23125.complete Sequence
410 bp assembled on 2011-01-25
GenBank Submission: KX804075
> BS23125.complete
GAAGTTATCAGTCGACATGTTGAAACCCAAAGCTTTGACGCAGGTTCTCA
GCCAGGCGAACACCGGCGGAGTGGAGAACACCCTCCTGCTCAGCCAGGAG
GGAGCTCTATTGGCCTACTCCGGTTATGGCGATAAGGATGCCAGGATAAC
GGCGGCCATAGCCAGCAACATATGGGCGGCCTACGAGAAGCATGGACGCA
ACGCCTTTCGCGAAGGTCGCCTCACTTTCGTGCTCATCGATTGTGAAAAC
GGTCATGTGGCCATCACACAGGTTGCCAGTGTCCTTTTGTGCCTGTACGC
CAAGCAAACGGTGGGATTGGGTCTTCTGAAGCAAAAGGCCATGTCACTGG
CCTCCTATTTGGAGCGACCGCTTAAGCAGATCTCGGCCTCATAAAAGCTT
TCTAGACCAT
BS23125.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:26:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5189-RB | 378 | CG5189-PB | 1..378 | 17..394 | 1890 | 100 | Plus |
CG5189-RA | 378 | CG5189-PA | 1..378 | 17..394 | 1890 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:26:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30120-RB | 2533 | CG30120-RB | 91..468 | 17..394 | 1890 | 100 | Plus |
CG5189-RB | 2533 | CG5189-RB | 91..468 | 17..394 | 1890 | 100 | Plus |
CG5189-RA | 684 | CG5189-RA | 91..468 | 17..394 | 1890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:26:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18446764..18446952 | 85..273 | 945 | 100 | Plus |
2R | 25286936 | 2R | 18447014..18447140 | 268..394 | 635 | 100 | Plus |
2R | 25286936 | 2R | 18446638..18446705 | 17..84 | 340 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:26:45 has no hits.
BS23125.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:08 Download gff for
BS23125.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5189-RB | 74..444 | 22..392 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:56:51 Download gff for
BS23125.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30120-RB | 96..466 | 22..392 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:26 Download gff for
BS23125.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5189-RA | 96..466 | 22..392 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:26 Download gff for
BS23125.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18446643..18446705 | 22..84 | 100 | -> | Plus |
2R | 18446764..18446950 | 85..271 | 100 | -> | Plus |
2R | 18447018..18447138 | 272..392 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:56:51 Download gff for
BS23125.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14334148..14334210 | 22..84 | 100 | -> | Plus |
arm_2R | 14334269..14334455 | 85..271 | 100 | -> | Plus |
arm_2R | 14334523..14334643 | 272..392 | 100 | | Plus |
BS23125.pep Sequence
Translation from 16 to 393
> BS23125.pep
MLKPKALTQVLSQANTGGVENTLLLSQEGALLAYSGYGDKDARITAAIAS
NIWAAYEKHGRNAFREGRLTFVLIDCENGHVAITQVASVLLCLYAKQTVG
LGLLKQKAMSLASYLERPLKQISAS*
BS23125.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:12:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5189-PB | 125 | CG5189-PB | 1..125 | 1..125 | 621 | 100 | Plus |
CG5189-PA | 125 | CG5189-PA | 1..125 | 1..125 | 621 | 100 | Plus |