BS23127.complete Sequence
605 bp assembled on 2011-01-25
GenBank Submission: KX801103
> BS23127.complete
GAAGTTATCAGTCGACATGTTATCGACCAAGTTAGTTTGCATCGCACTGG
TCAGCCTGGCTTTTGGCCAAGTTTATCTGGTGGCCAGCGAGGAAACCATT
ACCCTTTGTCCCACCAACTTTACCCAGGTGGCGGATAAGTGTCTCCTGGT
GGATGGCAGTTGGAAGAACTTCTACGAGTCGGATCGCCATTGTCGATCCC
TTAACGCCGGACTTCTGAGCATTAGCAATCCAACGGAATTCAATGTCATC
AACGAATGGCTGCCGATCATTGCACCATACCAGCCGGAGTTCTGGACATC
CGGAAACAAGCTGGGCGGAACTTCCGATTACTACTGGCAGAGTACTGGGC
AGAAGGCTGTCTACCTTCCCTGGAGTGCTGGTCAACCCACTACCACCGCC
GGTGATTGTCTTACACTGATGGCCAACGTCACCATGACTCCCGAAGAAGC
CATATTGAGTGTGCACCGCCTAACGGTAAAGCCCTGCACCCAATGGGCAC
CCCACATCTGCCAGGCTCCACTGGAAATCTTCAAGACCCAGCTTTGTCTC
AATACCACAGCTTTCTTCGAGGCGAAGATACCCGTTTAAAAGCTTTCTAG
ACCAT
BS23127.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:26:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14500-RA | 573 | CG14500-PA | 1..573 | 17..589 | 2865 | 100 | Plus |
| CG14499-RB | 183 | CG14499-PB | 1..157 | 17..173 | 395 | 83.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:26:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14500-RA | 677 | CG14500-RA | 13..585 | 17..589 | 2865 | 100 | Plus |
| CG14499-RB | 867 | CR14499-RB | 16..582 | 17..588 | 1280 | 82 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:26:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18188990..18189562 | 17..589 | 2865 | 100 | Plus |
| 2R | 25286936 | 2R | 18187722..18188288 | 17..588 | 1280 | 82 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:26:55 has no hits.
BS23127.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:09 Download gff for
BS23127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14500-RA | 17..582 | 22..587 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:56:55 Download gff for
BS23127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14500-RA | 18..583 | 22..587 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:29 Download gff for
BS23127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14500-RA | 18..583 | 22..587 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:29 Download gff for
BS23127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18188995..18189560 | 22..587 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:56:55 Download gff for
BS23127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14076500..14077065 | 22..587 | 100 | | Plus |
BS23127.pep Sequence
Translation from 16 to 588
> BS23127.pep
MLSTKLVCIALVSLAFGQVYLVASEETITLCPTNFTQVADKCLLVDGSWK
NFYESDRHCRSLNAGLLSISNPTEFNVINEWLPIIAPYQPEFWTSGNKLG
GTSDYYWQSTGQKAVYLPWSAGQPTTTAGDCLTLMANVTMTPEEAILSVH
RLTVKPCTQWAPHICQAPLEIFKTQLCLNTTAFFEAKIPV*
BS23127.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:12:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14500-PA | 190 | CG14500-PA | 1..190 | 1..190 | 1023 | 100 | Plus |
| CG14499-PB | 188 | CG14499-PB | 1..187 | 1..189 | 784 | 75.1 | Plus |
