BS23128.complete Sequence
1172 bp assembled on 2011-01-25
GenBank Submission: KX803878
> BS23128.complete
GAAGTTATCAGTCGACATGAGAAAATTCTGTTTGCTTCTTTTAATGGCGC
ATTTTGTGGCCTCAAGCCGAAATTTAAACGATATTCTCGGTCGCGAGGAG
TGGATTAGCATAGCCAAGGAATACATCAAGAACCACAAGCCTTACAAAGC
CAAAATCTACACACCCTACAAGCCGCGCATCGTAAATTTTACCAATCCGT
TCGATGGAGATTTTTGGGACACAACTACGGTGGCCACCAATCCGCAGGAG
ACTACTGGCTACTTCACTGGGGAAGTATCTACTACAACGGAGAAAAGTGC
CACTGAGGAATCTACAACTACGGCGGTGGATTATTCAACCACCGAATCTA
GTTATGTAACTTCAACCACGGATACTTTATATTCCACGACAACAGCTTGG
CCGGAAGTCACCAGCACAGATGCTATAGATGCCACTGAATCAGTAGCCCT
ATATTCCACAACAACTTCGAGTCCAGAAGCTGCAGATTCAACGACAGAAA
GCAATTCAGACAGTACTGAATATGCTGAATCAACGTTAATTTATCCAGAT
TTATCTACAGGATGGCAAGAAACTACTACAGAAACCATTCAGAGCTCTAC
AGGATTGCAGGAATCAACAACAACAGAGTTTATGCCAAGTACTACGGAAT
TTCCGGAATCAACGACTACTTTAAGTTCTGAATTTTCAGAGAAAGAACTA
ATAAAAACTACCACAGAAATAGAAATCAATCCAAGCACTACAGAATTGCC
GGAATCAACGACTGAATCTGCTGATTCTACCACAGAACCGAACGAATCCA
CGTTTGCATTATCCACAGATCAAACTACAACTGAAACAGCAGAAACTTCA
ACAGAAGAATTGTTTTCAACCACAGAAACCCAGGAATCTACTACATCCTT
GCTGGAAATCATTGCCACGACTCCGGGCGTGGAAACTACCACGTCGTATC
TGGATGCAGTGATTGACAGCACCGAAGAGGAAAGTTCTACATTATCAACA
CCATTTGGATTTAATTTAACAACAACGGAAATAGTAGAAACTCAAGTAGA
AACCACAACACCAAGGCAATTGAATTTCGTCGAAGATTACGTTCGCCAGA
GACCGAGAAAATTGAAGTACTCTTCGGACACGGAGCCGGAACTTTACTGG
TACTGAAAGCTTTCTAGACCAT
BS23128.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:27:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31253-RA | 1140 | CG31253-PA | 1..1140 | 17..1156 | 5700 | 100 | Plus |
| CG31131-RB | 1140 | CG31131-PB | 1..1140 | 17..1156 | 5700 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:27:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31253-RA | 1228 | CG31253-RA | 40..1181 | 17..1158 | 5710 | 100 | Plus |
| CG31131-RB | 1228 | CG31131-RB | 40..1181 | 17..1158 | 5710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:26:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27959393..27960534 | 1158..17 | 5710 | 100 | Minus |
| 3R | 32079331 | 3R | 27962039..27963180 | 1158..17 | 5710 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:26:59 has no hits.
BS23128.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:10 Download gff for
BS23128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31253-RA | 36..1174 | 17..1155 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:56:58 Download gff for
BS23128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31131-RB | 40..1178 | 17..1155 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:30 Download gff for
BS23128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31131-RB | 40..1178 | 17..1155 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:30 Download gff for
BS23128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27959396..27960534 | 17..1155 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:56:58 Download gff for
BS23128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23785118..23786256 | 17..1155 | 100 | | Minus |
BS23128.pep Sequence
Translation from 16 to 1155
> BS23128.pep
MRKFCLLLLMAHFVASSRNLNDILGREEWISIAKEYIKNHKPYKAKIYTP
YKPRIVNFTNPFDGDFWDTTTVATNPQETTGYFTGEVSTTTEKSATEEST
TTAVDYSTTESSYVTSTTDTLYSTTTAWPEVTSTDAIDATESVALYSTTT
SSPEAADSTTESNSDSTEYAESTLIYPDLSTGWQETTTETIQSSTGLQES
TTTEFMPSTTEFPESTTTLSSEFSEKELIKTTTEIEINPSTTELPESTTE
SADSTTEPNESTFALSTDQTTTETAETSTEELFSTTETQESTTSLLEIIA
TTPGVETTTSYLDAVIDSTEEESSTLSTPFGFNLTTTEIVETQVETTTPR
QLNFVEDYVRQRPRKLKYSSDTEPELYWY*
BS23128.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:13:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31253-PA | 379 | CG31253-PA | 1..379 | 1..379 | 1933 | 100 | Plus |
| CG31131-PB | 379 | CG31131-PB | 1..379 | 1..379 | 1933 | 100 | Plus |
| CG46026-PA | 666 | CG46026-PA | 253..541 | 69..349 | 318 | 36.4 | Plus |
| CG46026-PA | 666 | CG46026-PA | 373..662 | 69..348 | 307 | 35.4 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 329..593 | 69..348 | 298 | 31.4 | Plus |
| CG46026-PA | 666 | CG46026-PA | 206..468 | 69..348 | 296 | 35.7 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 178..456 | 69..348 | 296 | 30.1 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 367..646 | 69..348 | 295 | 29.6 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 377..647 | 69..348 | 295 | 30.7 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 230..509 | 69..348 | 293 | 29.6 | Plus |
| CG46026-PA | 666 | CG46026-PA | 225..509 | 69..350 | 292 | 33.9 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 408..677 | 69..349 | 292 | 29.9 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 219..496 | 69..348 | 290 | 30.4 | Plus |
| CG46026-PA | 666 | CG46026-PA | 287..577 | 69..348 | 289 | 34.8 | Plus |
| CG46026-PA | 666 | CG46026-PA | 303..594 | 69..348 | 289 | 34.8 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 268..538 | 69..348 | 289 | 30.4 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 296..570 | 69..348 | 289 | 30 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 432..710 | 69..348 | 289 | 30.6 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 483..769 | 69..347 | 288 | 30.1 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 124..403 | 61..348 | 287 | 29.9 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 216..487 | 69..348 | 285 | 30 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 159..432 | 69..348 | 284 | 30.4 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 247..526 | 69..348 | 284 | 30 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 277..556 | 69..348 | 284 | 29.3 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 141..425 | 69..348 | 283 | 28.8 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 211..479 | 69..348 | 283 | 30.4 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 246..511 | 69..349 | 282 | 30.6 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 307..586 | 69..348 | 282 | 28.6 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 348..633 | 69..348 | 282 | 29.7 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 447..727 | 69..349 | 282 | 29.5 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 167..451 | 69..348 | 281 | 29.5 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 248..527 | 69..348 | 281 | 29.6 | Plus |
| Muc4B-PC | 496 | CG32774-PC | 43..357 | 63..352 | 281 | 29 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 466..734 | 69..348 | 280 | 30.4 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 285..567 | 69..349 | 279 | 28.6 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 194..465 | 69..348 | 278 | 30 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 417..695 | 69..347 | 278 | 29.4 | Plus |
| CG46026-PA | 666 | CG46026-PA | 406..666 | 69..348 | 275 | 34.1 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 103..376 | 71..348 | 272 | 30.1 | Plus |
| CG46026-PA | 666 | CG46026-PA | 321..602 | 69..342 | 269 | 33.2 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 445..722 | 69..348 | 266 | 28.9 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 117..384 | 71..349 | 261 | 29.1 | Plus |
| CG46026-PA | 666 | CG46026-PA | 126..400 | 70..348 | 253 | 33.4 | Plus |
| CG46026-PA | 666 | CG46026-PA | 146..424 | 69..348 | 249 | 32.6 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 529..787 | 69..327 | 248 | 30 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 74..341 | 82..348 | 224 | 28.2 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 571..840 | 69..338 | 203 | 27.4 | Plus |
| CG46026-PA | 666 | CG46026-PA | 126..337 | 88..349 | 174 | 32.3 | Plus |
