BS23129.complete Sequence
974 bp assembled on 2011-01-25
GenBank Submission: KX803265
> BS23129.complete
GAAGTTATCAGTCGACATGTATGACCAATGCAATTTTTGGACATTTGAAA
AAATTAAGCATAACAAACAAAAATATTGGCCGCTGCTACAGGACGAGTGT
ATTTCAATTGAAATGGTGAAAGAAGGTTCTAAGGATGCAGAGTACTTATC
TGCTGAGTCTATTTCAAATTCGTTGAGACCTAAAGAACTTCATTACACTA
CAGATGCGCTTGCATCTAATTCAAATATTCATGAACATCCTCTTAGACGC
ACGAGAAATATTAGCACAAAAAAATTGGCACATGATGACAGTTTGCCTCA
CACGGGTGCTAAAAAAGGTAAAAGACGACGCAACAGTGATACGTCCAGTG
AAGAGGATCGGTGGCTTACCGCCATAGAAACCGGGAAACTAGACGTTGTT
GATGAGGAACTTAAAAAGATAAAGGACCCCAAACTTATGACAGCACGTCA
ACGTGCTATTTATGAACGGACACAGGACTCCGAAATAAATGGATTTATAG
AAGAGCTAATTGCTCTTCCAAGTGGTTATAAAGAAAAGGAAAAGCCGCAG
ACTGCGGAGGAAATTCATAAAGCTCTTCTGAAATCTCAAAAACGAAAACA
ACAAGCTGACGAACGCAGAGAAAAAGATAAATTAAAGACAATGGAGCGGT
TGTTAAAAAAACAGGCAACCAACAGGGATCGGATTTCAATTCGCAATAAG
TCTTTACAACAGCCCTCTTATCCAAAAATAACCTATATAAGTGCTGTAAC
TGGCAACTATGTAATAGTTCCCCCAGGTTACGAATATCCTTTAAAAGTTC
AACTCCCTCGTACACCTCCTCCTTCACAGGTGTGCTTTGTAAGCGGTTGT
GAAAATCGCAAGACATATAATTGTTCAACAACAAATGTTCCATTATGTAG
TCTTACATGTTATCGTAAGAATATCAACAAAATAAGAAAAACGTCTACAA
ATACGTAGAAGCTTTCTAGACCAT
BS23129.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:27:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10395-RE | 846 | CG10395-PE | 1..846 | 113..958 | 4230 | 100 | Plus |
| CG10395-RD | 846 | CG10395-PD | 1..846 | 113..958 | 4230 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:27:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10395-RE | 1438 | CG10395-RE | 237..1179 | 17..959 | 4715 | 100 | Plus |
| CG10395-RD | 1175 | CG10395-RD | 1..916 | 44..959 | 4580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:27:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 5350878..5351713 | 124..959 | 4180 | 100 | Plus |
| 2R | 25286936 | 2R | 5350713..5350823 | 17..127 | 555 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:27:04 has no hits.
BS23129.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:11 Download gff for
BS23129.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10395-RA | 221..1162 | 17..958 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:00 Download gff for
BS23129.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10395-RA | 237..1178 | 17..958 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:32 Download gff for
BS23129.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10395-RE | 237..1178 | 17..958 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:32 Download gff for
BS23129.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 5350713..5350821 | 17..125 | 100 | -> | Plus |
| 2R | 5350880..5351712 | 126..958 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:00 Download gff for
BS23129.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1238218..1238326 | 17..125 | 100 | -> | Plus |
| arm_2R | 1238385..1239217 | 126..958 | 100 | | Plus |
BS23129.pep Sequence
Translation from 16 to 957
> BS23129.pep
MYDQCNFWTFEKIKHNKQKYWPLLQDECISIEMVKEGSKDAEYLSAESIS
NSLRPKELHYTTDALASNSNIHEHPLRRTRNISTKKLAHDDSLPHTGAKK
GKRRRNSDTSSEEDRWLTAIETGKLDVVDEELKKIKDPKLMTARQRAIYE
RTQDSEINGFIEELIALPSGYKEKEKPQTAEEIHKALLKSQKRKQQADER
REKDKLKTMERLLKKQATNRDRISIRNKSLQQPSYPKITYISAVTGNYVI
VPPGYEYPLKVQLPRTPPPSQVCFVSGCENRKTYNCSTTNVPLCSLTCYR
KNINKIRKTSTNT*
BS23129.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:13:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10395-PE | 281 | CG10395-PE | 1..281 | 33..313 | 1453 | 100 | Plus |
| CG10395-PD | 281 | CG10395-PD | 1..281 | 33..313 | 1453 | 100 | Plus |
