BS23130.complete Sequence
821 bp assembled on 2011-01-25
GenBank Submission: KX802849
> BS23130.complete
GAAGTTATCAGTCGACATGCACAGATTAGTGGTTCTTTTAGTTTGCCTGG
CTGTGGGTTCCGCCTGTGCTGGCACAGTCGGGGTCTCCAATGGTGATCCC
TTCGAGCGCGAAGGTCGCATTGTCGGCGGCGAGGATACAACAATCGGAGC
GCATCCCTACCAGGTTTCCCTGCAGACCAAGAGTGGCTCCCACTTCTGTG
GTGGTAGTTTGATCAACGAAGATACTGTTGTCACGGCGGCCCACTGTCTG
GTGGGAAGGAAGGTCTCCAAGGTGTTCGTGCGTCTCGGTTCCACGCTCTA
CAATGAGGGTGGAATTGTGGTTGCTGTCCGGGAGTTGGCATACAATGAGG
ACTATAACTCGAAGACCATGGAGTACGACGTGGGCATACTGAAGCTGGAC
GAGAAGGTAAAGGAAACCGAAAATATTCGATATATCGAACTGGCCACGGA
AACGCCGCCCACTGGCACCACCGCTGTGGTCACCGGCTGGGGTTCCAAGT
GCTACTTCTGGTGCATGACACTGCCCAAGACGCTCCAGGAGGTCTATGTC
AACATTGTGGACTGGAAGACGTGCGCTTCGGATGAGTACAAGTACGGAGA
GATCATCTACGATAGCATGGTGTGTGCCTATGAAAAGAAGAAGGACGCTT
GCCAAGGAGATTCCGGTGGTCCTCTGGCGGTCGGTAACACTCTGGTGGGA
ATCGTGTCCTGGGGATATGCCTGTGCCTCGAACCTACTGCCCGGTGTTTA
CTCCGATGTGCCCGCTTTGCGAAAGTGGATCCTGAATGCAAGCGAAACTT
TGTAGAAGCTTTCTAGACCAT
BS23130.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:27:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| thetaTry-RA | 789 | CG12385-PA | 1..789 | 17..805 | 3945 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:27:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| thetaTry-RA | 1047 | CG12385-RA | 19..808 | 17..806 | 3950 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:27:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11341953..11342742 | 806..17 | 3950 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:27:09 has no hits.
BS23130.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:11 Download gff for
BS23130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| thetaTry-RA | 15..803 | 17..805 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:02 Download gff for
BS23130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| thetaTry-RA | 19..807 | 17..805 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:33 Download gff for
BS23130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| thetaTry-RA | 19..807 | 17..805 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:33 Download gff for
BS23130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11341954..11342742 | 17..805 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:02 Download gff for
BS23130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7229459..7230247 | 17..805 | 100 | | Minus |
BS23130.pep Sequence
Translation from 16 to 804
> BS23130.pep
MHRLVVLLVCLAVGSACAGTVGVSNGDPFEREGRIVGGEDTTIGAHPYQV
SLQTKSGSHFCGGSLINEDTVVTAAHCLVGRKVSKVFVRLGSTLYNEGGI
VVAVRELAYNEDYNSKTMEYDVGILKLDEKVKETENIRYIELATETPPTG
TTAVVTGWGSKCYFWCMTLPKTLQEVYVNIVDWKTCASDEYKYGEIIYDS
MVCAYEKKKDACQGDSGGPLAVGNTLVGIVSWGYACASNLLPGVYSDVPA
LRKWILNASETL*
BS23130.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:13:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| thetaTry-PA | 262 | CG12385-PA | 1..262 | 1..262 | 1390 | 100 | Plus |
| CG17571-PB | 258 | CG17571-PB | 1..258 | 1..262 | 666 | 51.9 | Plus |
| CG17571-PA | 258 | CG17571-PA | 1..258 | 1..262 | 666 | 51.9 | Plus |
| epsilonTry-PA | 256 | CG18681-PA | 1..254 | 1..260 | 579 | 47.3 | Plus |
| alphaTry-PA | 256 | CG18444-PA | 2..256 | 4..262 | 567 | 44.8 | Plus |
