BS23131.complete Sequence
953 bp assembled on 2011-01-25
GenBank Submission: KX802133
> BS23131.complete
GAAGTTATCAGTCGACATGGCCGGACAGCAGCACGATATTTCGCACGCCA
AGCGGGCCGCCTTTCAGGTTTTGGCCGGCGGCTCGGCCGGATTCCTGGAG
GTCTGCATCATGCAACCACTCGATGTAGTCAAAACTCGCATCCAGATCCA
GGCCACTCCCGCGCCGAATGCCGCAGCTCTTGGTGAGGTGCACTACAATG
GCGTCTTCGATTGCTTCGCCAAGATGTACCGCCACGAGGGCATCTCCTCC
TACTGGAAGGGCATCATGCCGCCAATCCTGGCCGAGACGCCCAAGCGGGC
CATCAAGTTCCTGGTGTTCGAGCAGACGAAGCCGCTCTTTCAATTCGGCT
CGCCCACTCCCACGCCGCTGACCTTTTCTCTGGCTGGACTGACAGCCGGC
ACACTGGAAGCCATAGCCGTGAATCCCTTCGAGGTGGTGAAGGTGGCCCA
GCAGGCTGATCGCCAAAAAAAGATGCTCAGCACGTTCGCCGTGGCCAAGG
GTATCATACAGCAGGACGGATTGGGCTTCAGCGGCCTCAACAAGGGCATC
ACCGCCACCATGGGACGCAATGGAGTCTTCAACATGGTGTACTTCGGGTT
CTACCACAGCGTGAAGAACGTGGTGCCCGAGTACAAGGAGAGCCATTTGG
AGTTTCTGCGCAAGGTGACCATCGGCTTCCTGGCCGGCACTCTGGCCTGC
TTCGTCAACATCCCATTCGACGTGGCCAAGTCACGCATCCAGGGACCGCA
ACCGGTCCCCGGGCAGATAAAATACCGAGGAACCCTCAGCTCCATGGGCA
TCGTCTACCGCGAGGAAGGATTCCGAGCGCTGTACAAAGGGCTCGTTCCC
AAGATTATGCGTTTGGGCCCAGGTGGAGCTATTCTGCTGCTGGTCTTCGA
GTACTCCTACGATTACCTGCTCCACAACTACTCCTAGAAGCTTTCTAGAC
CAT
BS23131.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:27:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5254-RA | 921 | CG5254-PA | 1..921 | 17..937 | 4605 | 100 | Plus |
| CG5254-RB | 714 | CG5254-PB | 1..714 | 224..937 | 3570 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:27:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5254-RA | 1236 | CG5254-RA | 151..1071 | 17..937 | 4605 | 100 | Plus |
| CG5254-RB | 1362 | CG5254-RB | 447..1197 | 187..937 | 3755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:27:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 757803..758554 | 186..937 | 3760 | 100 | Plus |
| X | 23542271 | X | 756336..756509 | 17..190 | 870 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:27:14 has no hits.
BS23131.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:12 Download gff for
BS23131.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5254-RA | 149..1069 | 17..937 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:05 Download gff for
BS23131.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5254-RA | 151..1071 | 17..937 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:35 Download gff for
BS23131.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5254-RA | 151..1071 | 17..937 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:35 Download gff for
BS23131.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 756336..756506 | 17..187 | 100 | -> | Plus |
| X | 757805..758554 | 188..937 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:05 Download gff for
BS23131.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 650369..650539 | 17..187 | 100 | -> | Plus |
| arm_X | 651838..652587 | 188..937 | 100 | | Plus |
BS23131.pep Sequence
Translation from 16 to 936
> BS23131.pep
MAGQQHDISHAKRAAFQVLAGGSAGFLEVCIMQPLDVVKTRIQIQATPAP
NAAALGEVHYNGVFDCFAKMYRHEGISSYWKGIMPPILAETPKRAIKFLV
FEQTKPLFQFGSPTPTPLTFSLAGLTAGTLEAIAVNPFEVVKVAQQADRQ
KKMLSTFAVAKGIIQQDGLGFSGLNKGITATMGRNGVFNMVYFGFYHSVK
NVVPEYKESHLEFLRKVTIGFLAGTLACFVNIPFDVAKSRIQGPQPVPGQ
IKYRGTLSSMGIVYREEGFRALYKGLVPKIMRLGPGGAILLLVFEYSYDY
LLHNYS*
BS23131.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:13:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5254-PA | 306 | CG5254-PA | 1..306 | 1..306 | 1585 | 100 | Plus |
| CG5254-PB | 237 | CG5254-PB | 1..237 | 70..306 | 1228 | 100 | Plus |
| CG9582-PB | 300 | CG9582-PB | 13..295 | 14..301 | 770 | 52.1 | Plus |
| CG9582-PA | 300 | CG9582-PA | 13..295 | 14..301 | 770 | 52.1 | Plus |
| CG18418-PA | 311 | CG18418-PA | 21..281 | 21..285 | 305 | 30.1 | Plus |
