Clone BS23133 Report

Search the DGRC for BS23133

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:231
Well:33
Vector:pDNR-Dual
Associated Gene/TranscriptCG13154-RA
Protein status:BS23133.pep: full length peptide match
Sequenced Size:773

Clone Sequence Records

BS23133.complete Sequence

773 bp assembled on 2011-01-25

GenBank Submission: KX806286

> BS23133.complete
GAAGTTATCAGTCGACATGGGAATTAAATTGGACATGAATGGTTTATTGG
TTTTGTTTTTGTGCGCCTTTTGCTGCAGCGTGGTGGCCAAACCACCGACA
GCTCGGCGGGCACAGCTGCACGACGATGTCCAGCTTATCCATCCCCACAT
CATCACCATAGAGCGTTTAGAGAATTTGCTGCGGCGTGCTGGGGAAATCT
TTGGTCCGGCTCTAGAGGAAGATGCCATGGCGGAGGCCAGTAGTCAGGTG
CAGGAGCAAGTGCAGCCGCAGCAGCGAATGCTGCCGCCAACGGAGCAGCC
GTATAACTTCTATTTACCTCTATACGACTTCGTGGAACCCAAGCTGGATG
CCAAGAGCCGAATGCTGGAGAAGATTGCTCCTCCGCCGCAAAAGACGGAG
CACAACTACTACGCGGAAAAGCCAAAAAAGAAGCCAAAGAAGTTTAACGC
TGCCAACAAGCACATCAACCTCAATCTCAAGTGGCTTAACACCTACGAGA
GGGCCATGGGCGGAGCAACTGCGCCCAAAGCCATGTATCTGGAGCAGGAC
GAGCGCAACCGAATAAACTTCGACGACTCCTTCTTTGCGGTGGACATGCA
GGTAAAGATTCCGGATAATCAGCCCCACAAGGAGCCAGCTGCGCCCACAG
AGCTCTTGCAGCATGGCGAAGAGCAGGCCGAGGAAGATTTGATGGCGGCT
CCTGCGCAGTTAGCCTTTAACTTCAAGTCTCCCGTCCAGGAAGAACGTCG
AACATAGAAGCTTTCTAGACCAT

BS23133.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:27:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG13154-RA 741 CG13154-PA 1..741 17..757 3690 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:27:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG13154-RA 918 CG13154-RA 83..824 17..758 3695 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:27:24
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12426977..12427682 758..53 3515 99.9 Minus
2R 25286936 2R 12427744..12427779 52..17 180 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:27:25 has no hits.

BS23133.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:13 Download gff for BS23133.complete
Subject Subject Range Query Range Percent Splice Strand
CG13154-RA 83..823 17..757 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:09 Download gff for BS23133.complete
Subject Subject Range Query Range Percent Splice Strand
CG13154-RA 83..823 17..757 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:41 Download gff for BS23133.complete
Subject Subject Range Query Range Percent Splice Strand
CG13154-RA 83..823 17..757 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:41 Download gff for BS23133.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12426978..12427682 53..757 99 <- Minus
2R 12427744..12427779 17..52 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:09 Download gff for BS23133.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8314483..8315187 53..757 99 <- Minus
arm_2R 8315249..8315284 17..52 100   Minus

BS23133.pep Sequence

Translation from 16 to 756

> BS23133.pep
MGIKLDMNGLLVLFLCAFCCSVVAKPPTARRAQLHDDVQLIHPHIITIER
LENLLRRAGEIFGPALEEDAMAEASSQVQEQVQPQQRMLPPTEQPYNFYL
PLYDFVEPKLDAKSRMLEKIAPPPQKTEHNYYAEKPKKKPKKFNAANKHI
NLNLKWLNTYERAMGGATAPKAMYLEQDERNRINFDDSFFAVDMQVKIPD
NQPHKEPAAPTELLQHGEEQAEEDLMAAPAQLAFNFKSPVQEERRT*

BS23133.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:13:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG13154-PA 246 CG13154-PA 1..246 1..246 1294 100 Plus