BS23133.complete Sequence
773 bp assembled on 2011-01-25
GenBank Submission: KX806286
> BS23133.complete
GAAGTTATCAGTCGACATGGGAATTAAATTGGACATGAATGGTTTATTGG
TTTTGTTTTTGTGCGCCTTTTGCTGCAGCGTGGTGGCCAAACCACCGACA
GCTCGGCGGGCACAGCTGCACGACGATGTCCAGCTTATCCATCCCCACAT
CATCACCATAGAGCGTTTAGAGAATTTGCTGCGGCGTGCTGGGGAAATCT
TTGGTCCGGCTCTAGAGGAAGATGCCATGGCGGAGGCCAGTAGTCAGGTG
CAGGAGCAAGTGCAGCCGCAGCAGCGAATGCTGCCGCCAACGGAGCAGCC
GTATAACTTCTATTTACCTCTATACGACTTCGTGGAACCCAAGCTGGATG
CCAAGAGCCGAATGCTGGAGAAGATTGCTCCTCCGCCGCAAAAGACGGAG
CACAACTACTACGCGGAAAAGCCAAAAAAGAAGCCAAAGAAGTTTAACGC
TGCCAACAAGCACATCAACCTCAATCTCAAGTGGCTTAACACCTACGAGA
GGGCCATGGGCGGAGCAACTGCGCCCAAAGCCATGTATCTGGAGCAGGAC
GAGCGCAACCGAATAAACTTCGACGACTCCTTCTTTGCGGTGGACATGCA
GGTAAAGATTCCGGATAATCAGCCCCACAAGGAGCCAGCTGCGCCCACAG
AGCTCTTGCAGCATGGCGAAGAGCAGGCCGAGGAAGATTTGATGGCGGCT
CCTGCGCAGTTAGCCTTTAACTTCAAGTCTCCCGTCCAGGAAGAACGTCG
AACATAGAAGCTTTCTAGACCAT
BS23133.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:27:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13154-RA | 741 | CG13154-PA | 1..741 | 17..757 | 3690 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:27:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13154-RA | 918 | CG13154-RA | 83..824 | 17..758 | 3695 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:27:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12426977..12427682 | 758..53 | 3515 | 99.9 | Minus |
2R | 25286936 | 2R | 12427744..12427779 | 52..17 | 180 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:27:25 has no hits.
BS23133.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:13 Download gff for
BS23133.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13154-RA | 83..823 | 17..757 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:09 Download gff for
BS23133.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13154-RA | 83..823 | 17..757 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:41 Download gff for
BS23133.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13154-RA | 83..823 | 17..757 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:41 Download gff for
BS23133.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12426978..12427682 | 53..757 | 99 | <- | Minus |
2R | 12427744..12427779 | 17..52 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:09 Download gff for
BS23133.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8314483..8315187 | 53..757 | 99 | <- | Minus |
arm_2R | 8315249..8315284 | 17..52 | 100 | | Minus |
BS23133.pep Sequence
Translation from 16 to 756
> BS23133.pep
MGIKLDMNGLLVLFLCAFCCSVVAKPPTARRAQLHDDVQLIHPHIITIER
LENLLRRAGEIFGPALEEDAMAEASSQVQEQVQPQQRMLPPTEQPYNFYL
PLYDFVEPKLDAKSRMLEKIAPPPQKTEHNYYAEKPKKKPKKFNAANKHI
NLNLKWLNTYERAMGGATAPKAMYLEQDERNRINFDDSFFAVDMQVKIPD
NQPHKEPAAPTELLQHGEEQAEEDLMAAPAQLAFNFKSPVQEERRT*
BS23133.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:13:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13154-PA | 246 | CG13154-PA | 1..246 | 1..246 | 1294 | 100 | Plus |