BS23134.complete Sequence
1547 bp assembled on 2011-01-25
GenBank Submission: KX806170
> BS23134.complete
GAAGTTATCAGTCGACATGTCGGTTGGAACTGTTCTACTAACGGCGCTGC
TGGCGCTAGTTGGTTACCTGCTGATGAAATGGCGAAGCACGATGAGGCAC
TGGCAGGATTTGGGTATTCCCTGTGAGGAGCCACACATACTAATGGGAAG
CATGAAGGGCGTACGAACCGCACGATCCTTTAACGAGATCTGGACGAGCT
ATTACAATAAGTTCCGTGGCTCCGGACCCTTTGCAGGTTTCTATTGGTTC
CGGCGACCGGCTGTTTTTGTCCTGGAAACATCGCTGGCGAAGCAGATCCT
GATCAAGGAGTTCAACAAGTTCACAGACCGAGGCTTCTTTCACAATCCCG
AGGATGATCCGTTGTCCGGTCAGTTGTTTTTACTTGATGGCCAAAAGTGG
AGGACCATGCGAAACAAGCTCTCCTCCACATTTACGTCCGGCAAAATGAA
GTATATGTTTCCCACTGTGGTCAAGGTGGCCAATGAATTCACCGATGTTT
TTGGCCAAAATGTGGCTAAGTCCCCTGTTGTCGAAGTGAGGGAGCTGTTG
GCGCGATTCACCACCGATGTTATTGGCACCTGCGCCTTCGGCATCGAGTG
CAGCAGCCTGAAGGACCCCGATGCAGAATTCCGCGAGATGGGTCGACGAT
CCCTAACGGAGCAGCGCCTGGGACCAGTTGGAATCGGATTCGTCAATAGC
TTTCCCAATTTGGCACGTCGCCTCCATATGAAAATGACAGCGGAGCCCAT
CGAAAGGTTCTTCATGCGCATCGTTAGGGAAACAGTGGCCTTCCGAGAGC
AAAACAATATTCGTCGCAACGATTTCATGGATCAGTTGATCGATTTGAAA
AACAAACCACTGATGGTATCACAATCCGGGGAGAGTGTTAACCTAACCAT
CGAGGAGATCGCAGCGCAGGCTTTTGTATTCTTTGCGGCTGGTTTCGAAA
CCTCGTCGACCACCATGGGATTCGCACTGTATGAACTGGCCCAGAATCAG
GACATTCAGAACCGGGTGAGGAAGGAGTGCCAGGAGGTTATTGAAAAGTG
CAACGGGGAGTTGAACTATGAAAGTATGAAGGATTTGGTCTATCTAGACC
AGGTTGTATCGGAAACCCTTCGATTGTACACCGTTCTCCCGGTCTTGAAT
CGCGAATGCCTGGAGGACTATGAGGTTCCTGGACATCCCAAATATGTCAT
CAAAAAGGGAATGCCCGTTTTGATTCCGTGTGGAGCCATGCACCGCGATG
AGAAACTGTATGCCAATCCAAACACCTTTAACCCAGACAACTTCTCGCCC
GAACGAGTGAAGGAACGCGACTCCGTGGAGTGGCTTCCATTCGGCGATGG
TCCCAGGAACTGCATCGGAATGCGGTTTGGTCAAATGCAGGCCAGAATTG
GATTGGCTCTCCTGATTAAGGACTTTAAGTTCTCAGTTTGCGAGAAGACA
ACCATTCCCATGACATACAACAAAGAAATGTTCCTTATTGCCAGTAATTC
TGGAATTTATCTGAAGGCTGAGCGAGTGTGAAAGCTTTCTAGACCAT
BS23134.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:26:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a21-RA | 1515 | CG10247-PA | 1..1515 | 17..1531 | 7575 | 100 | Plus |
| Cyp6a9-RB | 1515 | CG10246-PB | 83..1462 | 99..1478 | 3150 | 81.9 | Plus |
| Cyp6a2-RA | 1521 | CG9438-PA | 1231..1399 | 1241..1409 | 260 | 76.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:26:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a21-RA | 1631 | CG10247-RA | 82..1597 | 16..1531 | 7580 | 100 | Plus |
| Cyp6a9-RB | 1964 | CG10246-RB | 129..1508 | 99..1478 | 3150 | 81.9 | Plus |
| Cyp6a2-RA | 1674 | CG9438-RA | 1290..1458 | 1241..1409 | 260 | 76.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:26:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14885770..14886866 | 1112..16 | 5485 | 100 | Minus |
| 2R | 25286936 | 2R | 14885298..14885717 | 1531..1112 | 2100 | 100 | Minus |
| 2R | 25286936 | 2R | 14880231..14881244 | 1112..99 | 1680 | 77.7 | Minus |
| 2R | 25286936 | 2R | 14879812..14880178 | 1478..1112 | 1475 | 93.5 | Minus |
| 2R | 25286936 | 2R | 6779965..6780133 | 1409..1241 | 260 | 76.9 | Minus |
| 2R | 25286936 | 2R | 6780846..6780905 | 600..541 | 195 | 88.3 | Minus |
| 3R | 32079331 | 3R | 27479588..27479694 | 892..998 | 190 | 78.5 | Plus |
| 2L | 23513712 | 2L | 5623077..5623174 | 642..545 | 190 | 79.6 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:26:40 has no hits.
BS23134.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:08 Download gff for
BS23134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a21-RA | 87..1600 | 17..1530 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:56:50 Download gff for
BS23134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a21-RA | 83..1596 | 17..1530 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:25 Download gff for
BS23134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a21-RA | 83..1596 | 17..1530 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:25 Download gff for
BS23134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14885299..14885716 | 1113..1530 | 100 | <- | Minus |
| 2R | 14885770..14886865 | 17..1112 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:56:50 Download gff for
BS23134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10772804..10773221 | 1113..1530 | 100 | <- | Minus |
| arm_2R | 10773275..10774370 | 17..1112 | 100 | | Minus |
BS23134.pep Sequence
Translation from 16 to 1530
> BS23134.pep
MSVGTVLLTALLALVGYLLMKWRSTMRHWQDLGIPCEEPHILMGSMKGVR
TARSFNEIWTSYYNKFRGSGPFAGFYWFRRPAVFVLETSLAKQILIKEFN
KFTDRGFFHNPEDDPLSGQLFLLDGQKWRTMRNKLSSTFTSGKMKYMFPT
VVKVANEFTDVFGQNVAKSPVVEVRELLARFTTDVIGTCAFGIECSSLKD
PDAEFREMGRRSLTEQRLGPVGIGFVNSFPNLARRLHMKMTAEPIERFFM
RIVRETVAFREQNNIRRNDFMDQLIDLKNKPLMVSQSGESVNLTIEEIAA
QAFVFFAAGFETSSTTMGFALYELAQNQDIQNRVRKECQEVIEKCNGELN
YESMKDLVYLDQVVSETLRLYTVLPVLNRECLEDYEVPGHPKYVIKKGMP
VLIPCGAMHRDEKLYANPNTFNPDNFSPERVKERDSVEWLPFGDGPRNCI
GMRFGQMQARIGLALLIKDFKFSVCEKTTIPMTYNKEMFLIASNSGIYLK
AERV*
BS23134.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:12:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a21-PA | 504 | CG10247-PA | 1..504 | 1..504 | 2640 | 100 | Plus |
| Cyp6a9-PB | 504 | CG10246-PB | 1..504 | 1..504 | 2210 | 81.5 | Plus |
| Cyp6a2-PA | 506 | CG9438-PA | 3..506 | 6..504 | 1448 | 54.8 | Plus |
| Cyp6a8-PA | 506 | CG10248-PA | 1..506 | 1..504 | 1433 | 54.7 | Plus |
| Cyp6a18-PB | 507 | CG13977-PB | 13..507 | 10..504 | 1391 | 54 | Plus |
