BS23138.complete Sequence
416 bp assembled on 2011-01-25
GenBank Submission: KX802037
> BS23138.complete
GAAGTTATCAGTCGACATGGAAGGCCAACGCGTGGCAGTCGTCGCATTTG
CTGTTTTGCTCGCCGGATTGTGCGTGCTATCCGGTCTGAATGCGGCACCC
GTGGAATGCAATAATGGCGGTGGCATCCAGATCTCTGACGATGGTTTCCA
GAGCCAGACGCAAACCGGTCCCGGCTGCCAGACCCAGACCTCCGAGGATG
GAACCCAGAGCCAAAGCCAGAGTCAGTCGGGCAATGGCTACCAATCGCAG
ACGCAGTGCAGCGGCTCATCCTGTGGTCAGTTCAACACCTTCCCGCCGCT
ATTCACCATTAAGCCGCTGGAGCCATTGGCACCCATCACTTGGCAGCCAT
GGGGGCAAATGAGGAACAACCAGGTGCAGCAGCAGGTCAATTTTGGCTAA
AAGCTTTCTAGACCAT
BS23138.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:25:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5773-RC | 384 | CG5773-PC | 1..384 | 17..400 | 1920 | 100 | Plus |
CG5773-RB | 384 | CG5773-PB | 1..384 | 17..400 | 1920 | 100 | Plus |
CG5773-RA | 384 | CG5773-PA | 1..384 | 17..400 | 1920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:25:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5773-RC | 1285 | CG5773-RC | 83..468 | 15..400 | 1930 | 100 | Plus |
CG5773-RB | 514 | CG5773-RB | 83..468 | 15..400 | 1930 | 100 | Plus |
CG5773-RA | 586 | CG5773-RA | 155..540 | 15..400 | 1930 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:25:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18043113..18043421 | 400..92 | 1545 | 100 | Minus |
2R | 25286936 | 2R | 18043513..18043590 | 92..15 | 390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:25:48 has no hits.
BS23138.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:01 Download gff for
BS23138.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5773-RA | 157..538 | 17..398 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:56:28 Download gff for
BS23138.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5773-RA | 157..538 | 17..398 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:07 Download gff for
BS23138.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5773-RA | 157..538 | 17..398 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:07 Download gff for
BS23138.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18043115..18043421 | 92..398 | 100 | <- | Minus |
2R | 18043514..18043588 | 17..91 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:56:28 Download gff for
BS23138.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13930620..13930926 | 92..398 | 100 | <- | Minus |
arm_2R | 13931019..13931093 | 17..91 | 100 | | Minus |
BS23138.pep Sequence
Translation from 16 to 399
> BS23138.pep
MEGQRVAVVAFAVLLAGLCVLSGLNAAPVECNNGGGIQISDDGFQSQTQT
GPGCQTQTSEDGTQSQSQSQSGNGYQSQTQCSGSSCGQFNTFPPLFTIKP
LEPLAPITWQPWGQMRNNQVQQQVNFG*
BS23138.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:12:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5773-PC | 127 | CG5773-PC | 1..127 | 1..127 | 679 | 100 | Plus |
CG5773-PB | 127 | CG5773-PB | 1..127 | 1..127 | 679 | 100 | Plus |
CG5773-PA | 127 | CG5773-PA | 1..127 | 1..127 | 679 | 100 | Plus |