BS23139.complete Sequence
731 bp assembled on 2011-01-25
GenBank Submission: KX803213
> BS23139.complete
GAAGTTATCAGTCGACATGGGAGGATCCAGCTACGATGTGCTCAGGAAGC
AGGCGCGGAGCCTGGAAAACGAGATCGACCTGAAGCTGGTGGCATTCAGC
AAAATCGGAGCTGGCAGTGGAGGAGGTGGAAGTGGAGGACTAGGAGGCGT
TGACACATCGCCGCTCCTGGGCGAGCACGTCTTCGATTCGCTGTCGGAGG
AGATCGAGCAAATGCTGGAGAAGCTATCCTCGCTAAATGAGTCCATGTCC
GATTTGCCCGCCTCTGGAGCAGCCGCCATGCACACACTGCAGAGGCATCG
AGAGATCCTGCAGGGGTATCGCCAGGAGTTCAATAAGATCTGCGCCAATC
ACACAATGCGAATCGAGCGAGAGGAGCTGCTTCGTGGCTCAGGGTTGGCC
ACCAGCTCCGGCAGTCCATCCATCTCGGGCCTAAACCGGCGAGAAATGTA
CCTGAAGGAGAGCGGGCACCTCAACAGCGCCAGTCACTTGGTCAACGATC
AGATAAATATCGCGATTGAGACGCGTGACCATCTTCACGCCCAGCGACAA
GCATTCAAGCGGCTGCAGACCCGCTTTAACGATATCTCCAATCGATTCCC
ACTGATTTCCAGTCTCATTCAGCGCATCAACATTAAAAAGCGACGCGATT
CGCTGATCCTGGGAGCAGTTATTGGCTTCTGTGTGATCTTGCTGCTGCTC
TACGCCTTCAACTAGAAGCTTTCTAGACCAT
BS23139.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:27:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Gos28-RA | 699 | CG7700-PA | 1..699 | 17..715 | 3495 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:27:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Gos28-RA | 894 | CG7700-RA | 59..757 | 17..715 | 3495 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:27:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18664607..18664997 | 222..612 | 1955 | 100 | Plus |
3R | 32079331 | 3R | 18663882..18664067 | 38..223 | 930 | 100 | Plus |
3R | 32079331 | 3R | 18665065..18665170 | 610..715 | 530 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:27:38 has no hits.
BS23139.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:15 Download gff for
BS23139.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gos28-RA | 55..753 | 17..715 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:16 Download gff for
BS23139.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gos28-RA | 55..753 | 17..715 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:46 Download gff for
BS23139.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gos28-RA | 59..757 | 17..715 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:46 Download gff for
BS23139.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18663796..18663817 | 17..38 | 100 | -> | Plus |
3R | 18663883..18664067 | 39..223 | 100 | -> | Plus |
3R | 18664609..18664997 | 224..612 | 100 | -> | Plus |
3R | 18665068..18665170 | 613..715 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:16 Download gff for
BS23139.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14489518..14489539 | 17..38 | 100 | -> | Plus |
arm_3R | 14489605..14489789 | 39..223 | 100 | -> | Plus |
arm_3R | 14490331..14490719 | 224..612 | 100 | -> | Plus |
arm_3R | 14490790..14490892 | 613..715 | 100 | | Plus |
BS23139.pep Sequence
Translation from 16 to 714
> BS23139.pep
MGGSSYDVLRKQARSLENEIDLKLVAFSKIGAGSGGGGSGGLGGVDTSPL
LGEHVFDSLSEEIEQMLEKLSSLNESMSDLPASGAAAMHTLQRHREILQG
YRQEFNKICANHTMRIEREELLRGSGLATSSGSPSISGLNRREMYLKESG
HLNSASHLVNDQINIAIETRDHLHAQRQAFKRLQTRFNDISNRFPLISSL
IQRINIKKRRDSLILGAVIGFCVILLLLYAFN*
BS23139.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:13:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Gos28-PA | 232 | CG7700-PA | 1..232 | 1..232 | 1161 | 100 | Plus |