BS23143.complete Sequence
734 bp assembled on 2011-01-25
GenBank Submission: KX804578
> BS23143.complete
GAAGTTATCAGTCGACATGTTCAAGTTCGTGTGCCTTTTTGCGCTGATTG
CCTCCACGGCGGCGGCTACCTCGGAAGCGGACAGCTTGCTGACCAGCGCT
TTGAAGATGGTCAAGGACTGTGGCGAACGGTCCATGGTCTTGTGCATGAA
GGAGCGAGCCCTGCACTACTTCGATGCCGAGAACGGGGATGTGCGGCTCA
CCGAGGGCATTGCCCTGGTCAAGACCGATGAGATCCCGGTGGGTCGATCC
CTCAACGAGATGCAACTGCCCGAGGAGGTTGAGGCCCGGGAGGCCGAGGT
GGACTCCCTGCTGGTGGAGCGCGTTGCCCGCTTCTTCGGCACCCACACGC
TGCAGTTCAAGGTGCCCAAAGACTCCATCCAGGACATGCAGCGCGCCCTC
GAGGAATCTCGCGGCAAGAAGAAGGAGAAGAAGAAGTACCTGATGCCCCT
GCTAATGCTCTTCAAGCTGAAGATGGCCGCCCTGCTGCCCCTGGCCATTG
GCTTCCTGGCCCTGATCTCCTTCAAGGCCCTGGTCATCGGCAAGATCGCC
CTGCTGCTCTCCGGCATCATTGGGCTGAAGAAACTGCTCGAGTCGAAGAA
GGAGAACTACGAGGTCGTTGCGCACCCGCACTACGAGCACGAGCACAGCT
ACGGCCGCTCGCTGCCATCTGATGACTCCCAGGCCCAGCAGCTGGCCTAT
GCGGCGTATAAGCAATAAAAGCTTTCTAGACCAT
BS23143.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:27:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi9-RA | 702 | CG15592-PA | 1..702 | 17..718 | 3510 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:27:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi9-RA | 1360 | CG15592-RA | 202..904 | 16..718 | 3515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:27:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6261339..6261649 | 408..718 | 1555 | 100 | Plus |
| 3R | 32079331 | 3R | 6260607..6260865 | 149..407 | 1295 | 100 | Plus |
| 3R | 32079331 | 3R | 6260412..6260548 | 16..152 | 685 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:27:47 has no hits.
BS23143.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:16 Download gff for
BS23143.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi9-RA | 206..900 | 22..716 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:21 Download gff for
BS23143.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi9-RA | 208..902 | 22..716 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:51 Download gff for
BS23143.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi9-RA | 208..902 | 22..716 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:51 Download gff for
BS23143.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6261339..6261647 | 408..716 | 100 | | Plus |
| 3R | 6260418..6260547 | 22..151 | 100 | -> | Plus |
| 3R | 6260610..6260865 | 152..407 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:21 Download gff for
BS23143.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2086140..2086269 | 22..151 | 100 | -> | Plus |
| arm_3R | 2086332..2086587 | 152..407 | 100 | -> | Plus |
| arm_3R | 2087061..2087369 | 408..716 | 100 | | Plus |
BS23143.pep Sequence
Translation from 16 to 717
> BS23143.pep
MFKFVCLFALIASTAAATSEADSLLTSALKMVKDCGERSMVLCMKERALH
YFDAENGDVRLTEGIALVKTDEIPVGRSLNEMQLPEEVEAREAEVDSLLV
ERVARFFGTHTLQFKVPKDSIQDMQRALEESRGKKKEKKKYLMPLLMLFK
LKMAALLPLAIGFLALISFKALVIGKIALLLSGIIGLKKLLESKKENYEV
VAHPHYEHEHSYGRSLPSDDSQAQQLAYAAYKQ*
BS23143.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:13:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi9-PA | 233 | CG15592-PA | 1..233 | 1..233 | 1158 | 100 | Plus |
| Osi7-PA | 288 | CG1153-PA | 8..263 | 2..230 | 303 | 34.8 | Plus |
| Osi12-PA | 295 | CG1154-PA | 49..219 | 29..194 | 276 | 38.5 | Plus |
| Osi14-PA | 268 | CG1155-PA | 3..267 | 1..233 | 270 | 29.5 | Plus |
| Osi11-PA | 302 | CG15596-PA | 76..253 | 61..215 | 220 | 34.1 | Plus |
