Clone BS23144 Report

Search the DGRC for BS23144

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:231
Well:44
Vector:pDNR-Dual
Associated Gene/TranscriptCG16704-RA
Protein status:BS23144.pep: full length peptide match
Sequenced Size:272

Clone Sequence Records

BS23144.complete Sequence

272 bp assembled on 2011-01-25

GenBank Submission: KX806305

> BS23144.complete
GAAGTTATCAGTCGACATGAAATACCTAGTCGTTTTTGCACTCATCTGCT
GTCTTGTGGCATCAGCATTTGCGACTTTGAAAAACCCAATCTGTGGCGAG
GAGTTTGGCGTCAAGGGTACTTGCCGTTCCCTGCAACCCATGTGGACCTA
TCGCCCAGATACGAACGAGTGCTTCACCTTCAATTACTCCGGCTGCCACG
GAAACAATAATCTATTCCACAAAAAGTTGGAGTGCGAAGAAAAATGCAAA
ATATAAAAGCTTTCTAGACCAT

BS23144.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:27:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG16704-RB 240 CG16704-PB 1..240 17..256 1200 100 Plus
CG16704-RA 240 CG16704-PA 1..240 17..256 1200 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:27:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG16704-RB 350 CG16704-RB 48..287 17..256 1200 100 Plus
CG16704-RA 335 CG16704-RA 48..287 17..256 1200 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:27:51
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3692186..3692355 256..87 850 100 Minus
2L 23513712 2L 3692471..3692540 86..17 350 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:27:52 has no hits.

BS23144.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:17 Download gff for BS23144.complete
Subject Subject Range Query Range Percent Splice Strand
CG16704-RA 49..279 17..247 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:24 Download gff for BS23144.complete
Subject Subject Range Query Range Percent Splice Strand
CG16704-RA 48..278 17..247 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:52 Download gff for BS23144.complete
Subject Subject Range Query Range Percent Splice Strand
CG16704-RA 48..278 17..247 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:52 Download gff for BS23144.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3692195..3692355 87..247 100 <- Minus
2L 3692471..3692540 17..86 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:24 Download gff for BS23144.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3692195..3692355 87..247 100 <- Minus
arm_2L 3692471..3692540 17..86 100   Minus

BS23144.pep Sequence

Translation from 16 to 255

> BS23144.pep
MKYLVVFALICCLVASAFATLKNPICGEEFGVKGTCRSLQPMWTYRPDTN
ECFTFNYSGCHGNNNLFHKKLECEEKCKI*

BS23144.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:13:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG16704-PB 79 CG16704-PB 1..79 1..79 448 100 Plus
CG16704-PA 79 CG16704-PA 1..79 1..79 448 100 Plus
CG16713-PA 82 CG16713-PA 1..80 1..77 169 43.2 Plus
CG16712-PB 82 CG16712-PB 1..81 1..78 166 42.7 Plus
CG16712-PA 82 CG16712-PA 1..81 1..78 166 42.7 Plus