BS23144.complete Sequence
272 bp assembled on 2011-01-25
GenBank Submission: KX806305
> BS23144.complete
GAAGTTATCAGTCGACATGAAATACCTAGTCGTTTTTGCACTCATCTGCT
GTCTTGTGGCATCAGCATTTGCGACTTTGAAAAACCCAATCTGTGGCGAG
GAGTTTGGCGTCAAGGGTACTTGCCGTTCCCTGCAACCCATGTGGACCTA
TCGCCCAGATACGAACGAGTGCTTCACCTTCAATTACTCCGGCTGCCACG
GAAACAATAATCTATTCCACAAAAAGTTGGAGTGCGAAGAAAAATGCAAA
ATATAAAAGCTTTCTAGACCAT
BS23144.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:27:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16704-RB | 240 | CG16704-PB | 1..240 | 17..256 | 1200 | 100 | Plus |
CG16704-RA | 240 | CG16704-PA | 1..240 | 17..256 | 1200 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:27:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16704-RB | 350 | CG16704-RB | 48..287 | 17..256 | 1200 | 100 | Plus |
CG16704-RA | 335 | CG16704-RA | 48..287 | 17..256 | 1200 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:27:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3692186..3692355 | 256..87 | 850 | 100 | Minus |
2L | 23513712 | 2L | 3692471..3692540 | 86..17 | 350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:27:52 has no hits.
BS23144.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:17 Download gff for
BS23144.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16704-RA | 49..279 | 17..247 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:24 Download gff for
BS23144.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16704-RA | 48..278 | 17..247 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:52 Download gff for
BS23144.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16704-RA | 48..278 | 17..247 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:52 Download gff for
BS23144.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3692195..3692355 | 87..247 | 100 | <- | Minus |
2L | 3692471..3692540 | 17..86 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:24 Download gff for
BS23144.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3692195..3692355 | 87..247 | 100 | <- | Minus |
arm_2L | 3692471..3692540 | 17..86 | 100 | | Minus |
BS23144.pep Sequence
Translation from 16 to 255
> BS23144.pep
MKYLVVFALICCLVASAFATLKNPICGEEFGVKGTCRSLQPMWTYRPDTN
ECFTFNYSGCHGNNNLFHKKLECEEKCKI*
BS23144.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:13:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16704-PB | 79 | CG16704-PB | 1..79 | 1..79 | 448 | 100 | Plus |
CG16704-PA | 79 | CG16704-PA | 1..79 | 1..79 | 448 | 100 | Plus |
CG16713-PA | 82 | CG16713-PA | 1..80 | 1..77 | 169 | 43.2 | Plus |
CG16712-PB | 82 | CG16712-PB | 1..81 | 1..78 | 166 | 42.7 | Plus |
CG16712-PA | 82 | CG16712-PA | 1..81 | 1..78 | 166 | 42.7 | Plus |