BS23145.complete Sequence
902 bp assembled on 2011-01-25
GenBank Submission: KX802147
> BS23145.complete
GAAGTTATCAGTCGACATGCCACTGACTGCGGAGAGTGCCGCCCAACAGA
TTCAGGATCGCCTGAAGGACATTCAACAAAACATTCACAATGTGGACGAG
GAGCGTCGTCGTGCGGAAAACTCCATTGCTAGTCTGGTGCGATCTCTGCA
CGCCACCAATCAGAAGGTTAAGCCCCTGCTCAAGGCCAGTTTAACGGAGG
CTGCGCAGGAGGAGGCCACAATCCGAGCCGCACTGGCGAAAATCCACGAG
ATTCGAAGCATTCGCAATGAGAGGCGCATCCAAGCTCGCAACGCTGGAAA
TAAGGAGGCCATTCGACGGGGCGCCCTTATGAAAATGGTGCAGCTCTCAG
CGCAAACGTTGCCGTTATTCGTTGGCAAACTAGGAGAACGAGCACCAGCT
CTATGTGGAGCCATTCCCGCCGAGGGGAACTATGTGGCCAAGGTTGGCGA
CAATGTTGCCGCATTAGCTAAGGGAATTGATGAGGAGGAGAACTGGATCC
TGGCGGAAGTGGTGCAGTTCCTTCACCGTCAAAACAAATACGACGTAATT
GACATTGACGAGGAGCAAAAGGATCGCCATGTGCTGAGCAAGCGAAAGGT
CATCCCACTGCCTCTAATGCGTGCAAATCCTGAGACCGATGGTCACGCCC
TCTTCCCCAAGGACACAGTGGTAATGGCGCTATATCCACAGACCACCTGT
TTCTACAAGGCCATTGTCCATCGCCTGCCGCAAACCGCCACCGAGGATTA
CGAGGTGCTATTCGAGGATTCATCGTACACGAATGGCTATGCCGAACCCT
TGCCGGTCGCACAGCGCTATGTGATTGCATATCGTCCAACGAAAAAGGGG
GCTGGCAGTGGCAGCGGGAATCTATCATCAGCATAAAAGCTTTCTAGACC
AT
BS23145.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:27:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sgf29-RB | 870 | CG30390-PB | 1..870 | 17..886 | 4350 | 100 | Plus |
Sgf29-RA | 870 | CG30390-PA | 1..870 | 17..886 | 4350 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:27:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sgf29-RB | 1150 | CG30390-RB | 204..1077 | 15..888 | 4370 | 100 | Plus |
Sgf29-RA | 1027 | CG30390-RA | 81..954 | 15..888 | 4370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:27:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21292312..21292759 | 888..441 | 2240 | 100 | Minus |
2R | 25286936 | 2R | 21293037..21293268 | 284..53 | 1160 | 100 | Minus |
2R | 25286936 | 2R | 21292825..21292986 | 444..283 | 810 | 100 | Minus |
2R | 25286936 | 2R | 21293320..21293361 | 56..15 | 210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:27:57 has no hits.
BS23145.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:18 Download gff for
BS23145.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sgf29-RA | 118..985 | 17..884 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:26 Download gff for
BS23145.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sgf29-RA | 83..950 | 17..884 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:55 Download gff for
BS23145.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sgf29-RA | 83..950 | 17..884 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:55 Download gff for
BS23145.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21292316..21292757 | 443..884 | 100 | <- | Minus |
2R | 21292827..21292984 | 285..442 | 100 | <- | Minus |
2R | 21293037..21293265 | 56..284 | 100 | <- | Minus |
2R | 21293321..21293359 | 17..55 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:26 Download gff for
BS23145.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17179821..17180262 | 443..884 | 100 | <- | Minus |
arm_2R | 17180332..17180489 | 285..442 | 100 | <- | Minus |
arm_2R | 17180542..17180770 | 56..284 | 100 | <- | Minus |
arm_2R | 17180826..17180864 | 17..55 | 100 | | Minus |
BS23145.pep Sequence
Translation from 16 to 885
> BS23145.pep
MPLTAESAAQQIQDRLKDIQQNIHNVDEERRRAENSIASLVRSLHATNQK
VKPLLKASLTEAAQEEATIRAALAKIHEIRSIRNERRIQARNAGNKEAIR
RGALMKMVQLSAQTLPLFVGKLGERAPALCGAIPAEGNYVAKVGDNVAAL
AKGIDEEENWILAEVVQFLHRQNKYDVIDIDEEQKDRHVLSKRKVIPLPL
MRANPETDGHALFPKDTVVMALYPQTTCFYKAIVHRLPQTATEDYEVLFE
DSSYTNGYAEPLPVAQRYVIAYRPTKKGAGSGSGNLSSA*
BS23145.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:47:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sgf29-PB | 289 | CG30390-PB | 1..289 | 1..289 | 1458 | 100 | Plus |
Sgf29-PA | 289 | CG30390-PA | 1..289 | 1..289 | 1458 | 100 | Plus |