BS23148.complete Sequence
575 bp assembled on 2011-01-25
GenBank Submission: KX803717
> BS23148.complete
GAAGTTATCAGTCGACATGAACCTGGGAAGGCTGCTGAATCCACTGAGGA
GCACCGCATGTTCGGTGCGCAGCTACGGAAAGCACAACAAGAAGTTCCTC
TACAAAAATGGCCAGAAATTTGAGGGTATCACCTACTATCCCAGGACTCC
CGATCACCAGGATCCACCCGTGGAGCCGGCGAAACTTTTCCGGGTGCAGC
GCATCAAGCCGCTAAAGGGCAATCCCTACTGGGAGAATCGAATCCTCAAA
GATCTGGGACTAGACGGAAAGCAGAGCGATTTTACTGTCGTCAAGAACAT
ACCGGAGAACAATGCCCGCCTGTGGAAGATCAAGCATCTAATTAAGGTTA
CGCCGGTCACGTTCCCCTACGGAGAGCCCACTGCCCAGGATGTCCGGCAT
ACGATACTCAAGGAGAACGGCGAGTGCCTGGTAACCAAGGACCTGGGACC
CATCGATACCCGCCTGGCGGCTCGCCAGGATTACGACGAGCAGCCCAAGC
GACTGGATACCGATCTGCTGCGCAAAGATGCCCGCCTCAAGTGGCTAAAT
CCCTGGTAGAAGCTTTCTAGACCAT
BS23148.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:27:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL30-RA | 543 | CG7038-PA | 1..543 | 17..559 | 2715 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:27:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL30-RA | 696 | CG7038-RA | 97..639 | 17..559 | 2715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:27:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 4648172..4648589 | 142..559 | 2090 | 100 | Plus |
X | 23542271 | X | 4647967..4648095 | 17..145 | 645 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:27:33 has no hits.
BS23148.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:14 Download gff for
BS23148.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL30-RA | 91..633 | 17..559 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:14 Download gff for
BS23148.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL30-RA | 97..639 | 17..559 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:43 Download gff for
BS23148.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL30-RA | 97..639 | 17..559 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:43 Download gff for
BS23148.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4647967..4648094 | 17..144 | 100 | -> | Plus |
X | 4648175..4648589 | 145..559 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:14 Download gff for
BS23148.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 4542000..4542127 | 17..144 | 100 | -> | Plus |
arm_X | 4542208..4542622 | 145..559 | 100 | | Plus |
BS23148.pep Sequence
Translation from 16 to 558
> BS23148.pep
MNLGRLLNPLRSTACSVRSYGKHNKKFLYKNGQKFEGITYYPRTPDHQDP
PVEPAKLFRVQRIKPLKGNPYWENRILKDLGLDGKQSDFTVVKNIPENNA
RLWKIKHLIKVTPVTFPYGEPTAQDVRHTILKENGECLVTKDLGPIDTRL
AARQDYDEQPKRLDTDLLRKDARLKWLNPW*
BS23148.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:13:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL30-PA | 180 | CG7038-PA | 1..180 | 1..180 | 978 | 100 | Plus |