Clone BS23148 Report

Search the DGRC for BS23148

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:231
Well:48
Vector:pDNR-Dual
Associated Gene/TranscriptmRpL30-RA
Protein status:BS23148.pep: full length peptide match
Sequenced Size:575

Clone Sequence Records

BS23148.complete Sequence

575 bp assembled on 2011-01-25

GenBank Submission: KX803717

> BS23148.complete
GAAGTTATCAGTCGACATGAACCTGGGAAGGCTGCTGAATCCACTGAGGA
GCACCGCATGTTCGGTGCGCAGCTACGGAAAGCACAACAAGAAGTTCCTC
TACAAAAATGGCCAGAAATTTGAGGGTATCACCTACTATCCCAGGACTCC
CGATCACCAGGATCCACCCGTGGAGCCGGCGAAACTTTTCCGGGTGCAGC
GCATCAAGCCGCTAAAGGGCAATCCCTACTGGGAGAATCGAATCCTCAAA
GATCTGGGACTAGACGGAAAGCAGAGCGATTTTACTGTCGTCAAGAACAT
ACCGGAGAACAATGCCCGCCTGTGGAAGATCAAGCATCTAATTAAGGTTA
CGCCGGTCACGTTCCCCTACGGAGAGCCCACTGCCCAGGATGTCCGGCAT
ACGATACTCAAGGAGAACGGCGAGTGCCTGGTAACCAAGGACCTGGGACC
CATCGATACCCGCCTGGCGGCTCGCCAGGATTACGACGAGCAGCCCAAGC
GACTGGATACCGATCTGCTGCGCAAAGATGCCCGCCTCAAGTGGCTAAAT
CCCTGGTAGAAGCTTTCTAGACCAT

BS23148.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:27:34
Subject Length Description Subject Range Query Range Score Percent Strand
mRpL30-RA 543 CG7038-PA 1..543 17..559 2715 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:27:35
Subject Length Description Subject Range Query Range Score Percent Strand
mRpL30-RA 696 CG7038-RA 97..639 17..559 2715 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:27:32
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4648172..4648589 142..559 2090 100 Plus
X 23542271 X 4647967..4648095 17..145 645 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:27:33 has no hits.

BS23148.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:14 Download gff for BS23148.complete
Subject Subject Range Query Range Percent Splice Strand
mRpL30-RA 91..633 17..559 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:14 Download gff for BS23148.complete
Subject Subject Range Query Range Percent Splice Strand
mRpL30-RA 97..639 17..559 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:43 Download gff for BS23148.complete
Subject Subject Range Query Range Percent Splice Strand
mRpL30-RA 97..639 17..559 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:43 Download gff for BS23148.complete
Subject Subject Range Query Range Percent Splice Strand
X 4647967..4648094 17..144 100 -> Plus
X 4648175..4648589 145..559 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:14 Download gff for BS23148.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 4542000..4542127 17..144 100 -> Plus
arm_X 4542208..4542622 145..559 100   Plus

BS23148.pep Sequence

Translation from 16 to 558

> BS23148.pep
MNLGRLLNPLRSTACSVRSYGKHNKKFLYKNGQKFEGITYYPRTPDHQDP
PVEPAKLFRVQRIKPLKGNPYWENRILKDLGLDGKQSDFTVVKNIPENNA
RLWKIKHLIKVTPVTFPYGEPTAQDVRHTILKENGECLVTKDLGPIDTRL
AARQDYDEQPKRLDTDLLRKDARLKWLNPW*

BS23148.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:13:30
Subject Length Description Subject Range Query Range Score Percent Strand
mRpL30-PA 180 CG7038-PA 1..180 1..180 978 100 Plus