BS23151.complete Sequence
1028 bp assembled on 2011-01-25
GenBank Submission: KX801273
> BS23151.complete
GAAGTTATCAGTCGACATGGGTTTGACGCGCGTGCTGGTGAAGGATGGCG
GTTTCGGCACCCAGATGACCGTCCATGTGGGTGACTCTGTGGATGGGGAT
CCGCTATGGAGTGCCCGCTTCAATGCCACCAATCCGGCGGCCATTATCAG
CACCCACCTGGACTTTTTGCAGAATGGTGCCGATATCATTTTGACCAACA
CCTACCAGTCCAGTGTCGATGGTTACATGGAGTACCTGGAGCTGGACGAG
GAGCAGAGCATCGAGCTGATAAAGAACACGGTCCGCCTGGCCCACATCGC
CAAGGAACGCTATCTCACCGAGTGCTATCAGGCGCAGCTGTCGGTGCAGG
AGGGATACCCTTTGATCATTGCCTCCATTGGACCCTTTGGGGCCCACCTG
CACGATGGCTCCGAGTACACCGGTAGCTATGCCGACTTTGTGCCGGCCAA
GGAGATTACGGACTGGCATCGCGTGAGGATCGAAGCGTGCTTGGAGGCTG
GTGTGGATGCGCTGGCCATCGAGACGATTCCCTGTCAAATGGAGGCGGAG
GCCCTGGTGGAGATGCTGTGCGATGATTATCCGGATGTGAAGTTCTGGGT
GGCCTTCCAGTGCAAGGATGAGAATACCCTGGCGCATGGAGAAACCTTTG
CGGACGCGGCGAATGCTATTTGGGACCTCTTGGCTGAACGAAATGCCCAG
GATAAGTGCCTGGCCATCGGAGTAAATTGTGTGCATCCGAAGTTTGTGAC
CCCGCTCTTTAAGAGTTTGAATGGTGACCGCGAAGTGGGTGAGCAGATAC
CGTTGGTGGTGTACCCCAATAGCGGAGAGGTATACGACGTGGTCAACGGC
TGGCAGGGAAGGGAGCACTGTGTGCCCTTGGCGAACTACGTTCCGGAGTG
GGCGCAACTGGGGGCCAAGGTCATTGGGGGATGCTGTCGCACTTATGCGA
GGGATATACGCCACATCGGGGAGGCCATTCGCGACTGGAACAAACTGAAG
AAGCTCTCATAGAAGCTTTCTAGACCAT
BS23151.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:28:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10621-RC | 996 | CG10621-PC | 1..996 | 17..1012 | 4980 | 100 | Plus |
| CG10621-RB | 996 | CG10621-PB | 1..996 | 17..1012 | 4980 | 100 | Plus |
| CG10621-RA | 996 | CG10621-PA | 1..996 | 17..1012 | 4980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:28:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10621-RC | 1419 | CG10621-RC | 290..1286 | 16..1012 | 4985 | 100 | Plus |
| CG10621-RB | 1519 | CG10621-RB | 390..1386 | 16..1012 | 4985 | 100 | Plus |
| CG10621-RA | 1302 | CG10621-RA | 173..1169 | 16..1012 | 4985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:28:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18952339..18952998 | 1012..353 | 3300 | 100 | Minus |
| 2L | 23513712 | 2L | 18953157..18953337 | 354..174 | 905 | 100 | Minus |
| 2L | 23513712 | 2L | 18953404..18953561 | 173..16 | 790 | 100 | Minus |
| 2L | 23513712 | 2L | 18956799..18956949 | 239..89 | 185 | 74.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:28:18 has no hits.
BS23151.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:21 Download gff for
BS23151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10621-RA | 168..1163 | 17..1012 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:36 Download gff for
BS23151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10621-RA | 174..1169 | 17..1012 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:05:05 Download gff for
BS23151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10621-RA | 174..1169 | 17..1012 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:05:05 Download gff for
BS23151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18952339..18952997 | 354..1012 | 100 | <- | Minus |
| 2L | 18953158..18953337 | 174..353 | 100 | <- | Minus |
| 2L | 18953404..18953560 | 17..173 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:36 Download gff for
BS23151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18953404..18953560 | 17..173 | 100 | | Minus |
| arm_2L | 18952339..18952997 | 354..1012 | 100 | <- | Minus |
| arm_2L | 18953158..18953337 | 174..353 | 100 | <- | Minus |
BS23151.pep Sequence
Translation from 16 to 1011
> BS23151.pep
MGLTRVLVKDGGFGTQMTVHVGDSVDGDPLWSARFNATNPAAIISTHLDF
LQNGADIILTNTYQSSVDGYMEYLELDEEQSIELIKNTVRLAHIAKERYL
TECYQAQLSVQEGYPLIIASIGPFGAHLHDGSEYTGSYADFVPAKEITDW
HRVRIEACLEAGVDALAIETIPCQMEAEALVEMLCDDYPDVKFWVAFQCK
DENTLAHGETFADAANAIWDLLAERNAQDKCLAIGVNCVHPKFVTPLFKS
LNGDREVGEQIPLVVYPNSGEVYDVVNGWQGREHCVPLANYVPEWAQLGA
KVIGGCCRTYARDIRHIGEAIRDWNKLKKLS*
BS23151.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:47:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10621-PC | 331 | CG10621-PC | 1..331 | 1..331 | 1770 | 100 | Plus |
| CG10621-PB | 331 | CG10621-PB | 1..331 | 1..331 | 1770 | 100 | Plus |
| CG10621-PA | 331 | CG10621-PA | 1..331 | 1..331 | 1770 | 100 | Plus |
| CG10623-PC | 331 | CG10623-PC | 14..328 | 6..325 | 915 | 53.7 | Plus |
| CG10623-PB | 331 | CG10623-PB | 14..328 | 6..325 | 915 | 53.7 | Plus |
