BS23152.complete Sequence
1301 bp assembled on 2011-01-25
GenBank Submission: KX806107
> BS23152.complete
GAAGTTATCAGTCGACATGACTGACAAGTTAGATGCGGAACAATTTAACG
ACGACGAACTAGAGGCACCTGCTTGGCTGAATCGTCAATTTATAGAGGAA
ATTCTGAGCGCGTACGAAGATTCCCCGGAACTAAAAGTTGTCGATCTTAA
AATCACACCCGCAAGTGCCCAGGGAGATCACTATGCCAGCGTTATGTTCC
GAACAACTGCAGAGTGTACCACCGCGAAGGGAAAGTTCAGTAGGCCACTA
ATCATCAAGGCGATGCCCGAGCAGGATGGACACAAGAAGGATATGCTCAG
CGAATCGCATCTATTCGAAACCGAGATCGGAATGTACTGCCAGGTTCTTC
CGGAATTCGAGAGAATTCTGCGGGAATCCGGAGACGATACAAAGCTATTT
GTTCCCTGCATTTACCATAGCCTGGAGCCGCGTAAGGTGATGATATTTGA
GGACCTTGTGCCCCAGGGATATTATGTCATTCGAGACCGTCCGGTTGCTC
AGGAAGAACTCAAAACAGCCTTTGCTAAACTGGCCAAATGGCATGCAATT
AGCATGAAATACATTAAGGAGCAACCTGACTTCCTAAAGGAGTTTAAGTA
TGGCCTCTTCGAGATGCCCACTGTAAAGACCGACCCTTTTATTACAACTG
GCATGCAGAGCTTCATTGAAATGCTGGACAGATTACCAGAGCTAAGAAAG
TATAAGCCTCATTTCGAAAAGATAAAAGATAAGTACATGCAACGACTACA
AGCTGTGATGAAGGAATACCATGAAAATCGAAAGAGTGATGCCTTCTATG
TCCTCTGTCATGGTGACTTCCATCTTCGCAATATGATGTTCAAGAACAAC
AAGGGGACGGGAGCCCACGAGGATACCATGCTGGTGGATTTCCAGATTAG
CAACCTTTGTCCCATCACAATTGATCTCACATATTCCATCTATATGCTGA
TGGAGCCGGAACAACGCAGAGAAATGGGAAAGGACTTGATTAATCACTAC
TTAACCGTTTTGGTTGCCACCCTCAAGAGCATTGGATACCCAGGTGAACT
GCCAACCCAAGCGAAACTCTGGGATGAAATCCATAAGAACAAGTATTATG
ATTTCTTTTTGTTGAGCACTTTTCTGCCCTTGATTTTGGCCATCAAATCG
AAGAGTTTTAAAGTGAACGACCTTATACAGGATCCGGAAACCCGCCAAAA
AACCTACTTTTTGGATACATATGTTAAAGATGTTTCCAAACTATTGCCGA
AATTCGAGCAACTTGGCTACTTTAAATGTCTATAGAAGCTTTCTAGACCA
T
BS23152.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:28:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31300-RA | 1269 | CG31300-PA | 1..1269 | 17..1285 | 6345 | 100 | Plus |
CG31104-RA | 1263 | CG31104-PA | 31..1103 | 53..1125 | 1525 | 76.1 | Plus |
CG11893-RA | 1251 | CG11893-PA | 15..722 | 31..738 | 810 | 74.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:28:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31300-RA | 1474 | CG31300-RA | 72..1340 | 17..1285 | 6345 | 100 | Plus |
CG31104-RA | 1382 | CG31104-RA | 91..1163 | 53..1125 | 1525 | 76.1 | Plus |
CG11893-RA | 1415 | CG11893-RA | 53..760 | 31..738 | 810 | 74.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:28:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25283691..25284245 | 17..571 | 2775 | 100 | Plus |
3R | 32079331 | 3R | 25284305..25284835 | 570..1100 | 2655 | 100 | Plus |
3R | 32079331 | 3R | 25284905..25285090 | 1100..1285 | 930 | 100 | Plus |
3R | 32079331 | 3R | 25286135..25286665 | 570..1100 | 810 | 76.8 | Plus |
3R | 32079331 | 3R | 25289941..25290648 | 31..738 | 810 | 74.3 | Plus |
3R | 32079331 | 3R | 25285563..25285978 | 53..468 | 685 | 77.6 | Plus |
3R | 32079331 | 3R | 25304361..25304650 | 164..453 | 310 | 73.8 | Plus |
3R | 32079331 | 3R | 25287638..25287958 | 170..490 | 300 | 72.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:28:23 has no hits.
BS23152.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:22 Download gff for
BS23152.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31300-RA | 70..1338 | 17..1285 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:38 Download gff for
BS23152.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31300-RA | 72..1340 | 17..1285 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:05:06 Download gff for
BS23152.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31300-RA | 72..1340 | 17..1285 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:05:06 Download gff for
BS23152.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25283691..25284245 | 17..571 | 100 | -> | Plus |
3R | 25284307..25284835 | 572..1100 | 100 | -> | Plus |
3R | 25284906..25285090 | 1101..1285 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:38 Download gff for
BS23152.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21109413..21109967 | 17..571 | 100 | -> | Plus |
arm_3R | 21110029..21110557 | 572..1100 | 100 | -> | Plus |
arm_3R | 21110628..21110812 | 1101..1285 | 100 | | Plus |
BS23152.pep Sequence
Translation from 16 to 1284
> BS23152.pep
MTDKLDAEQFNDDELEAPAWLNRQFIEEILSAYEDSPELKVVDLKITPAS
AQGDHYASVMFRTTAECTTAKGKFSRPLIIKAMPEQDGHKKDMLSESHLF
ETEIGMYCQVLPEFERILRESGDDTKLFVPCIYHSLEPRKVMIFEDLVPQ
GYYVIRDRPVAQEELKTAFAKLAKWHAISMKYIKEQPDFLKEFKYGLFEM
PTVKTDPFITTGMQSFIEMLDRLPELRKYKPHFEKIKDKYMQRLQAVMKE
YHENRKSDAFYVLCHGDFHLRNMMFKNNKGTGAHEDTMLVDFQISNLCPI
TIDLTYSIYMLMEPEQRREMGKDLINHYLTVLVATLKSIGYPGELPTQAK
LWDEIHKNKYYDFFLLSTFLPLILAIKSKSFKVNDLIQDPETRQKTYFLD
TYVKDVSKLLPKFEQLGYFKCL*
BS23152.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:47:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31300-PA | 422 | CG31300-PA | 1..422 | 1..422 | 2226 | 100 | Plus |
CG31104-PA | 420 | CG31104-PA | 7..420 | 9..422 | 1647 | 72.2 | Plus |
CG11893-PA | 416 | CG11893-PA | 1..416 | 1..422 | 1587 | 67.8 | Plus |
CG13658-PB | 422 | CG13658-PB | 1..422 | 1..422 | 1440 | 62.6 | Plus |
CG31436-PA | 420 | CG31436-PA | 9..416 | 9..417 | 1233 | 55.7 | Plus |