BS23155.complete Sequence
1241 bp assembled on 2011-02-18
GenBank Submission: KX803931
> BS23155.complete
GAAGTTATCAGTCGACATGCAGTGGCTCAAAATGAAGCTTCGCTTCGTAA
ACTTAATTTTACTATTAATAAGCTCAACATGTGCCCAATTGGGGGGCGAT
CCCAATGGCTACCTCACCTACTGTCCGTGTATGGGACGCTTTGGCAACCA
GGCCGACCACTTCCTGGGATCATTGGCCTTCGCCAAGGCGCTTAATCGCA
CCCTGATCCTGCCGCCGTGGGTGGAGTATCGTAGGGGTGAACTGCGATCC
CGTCAGGTACCGTTCAACACATATTTTGAAGTGGAGCCCCTGAAGGAATA
CCATCGCGTCATCACCATGGCAGATTTCATGTGGCACCTGGCCGACGACA
TTTGGCCAGAATCGGAGCGAGTGTCATTTTGCTACAAGGAACGATATAGC
CTTCAGCAGGAGAAGAACGATCCAGACAAGCCCAATTGCCACGCCAAGGA
TGGCAATCCTTTTGGTCCCTTTTGGGACACTTTTCACATAGACTTTGTGC
GGTCAGAGTTCTATGCGCCACTTCATTTTGATGTGCATCATAGCAACGAG
GCTGCCAAGTGGCAGACCAAATATCCTGCAGAATCATATCCCGTACTCGC
GTTCACCGGAGCTCCGGCTAGTTTTCCTGTTCAGCTAGAGAACTGCAAGC
TGCAGCGCTACTTGCAGTGGAGTCAACGGTATAGGGAAGCATCTAAGGAT
TTCATCCGAGAGCAGTTGCCTCGGGGTGCCTTTTTGGGCATTCATCTGCG
CAACGGTATCGATTGGGTGAGAGCCTGTGAGCACGTCAAGGATAGCCAGC
ATCTGTTTGCCTCGCCGCAGTGCTTGGGCTATAAAAATGAACGTGGTGCA
CTCTACCCGGAGCTCTGCATGCCCTCCAAGGAGGCGATCATCCGCCAGCT
AAAGAGAACCATTAAGAACGTGCGCCAAACTCAGCCGGACAACGAAATCA
AATCAGTTTTCGTGGCGTCAGACTCCAATCACATGATTGGTGAACTAAAC
ACGGCCCTTAGTCGCATGGGCATCAGTGTGCACAAGCTGCCGGAGGATGA
TCCTTACCTGGACTTGGCCATTCTCGGACAGTCGAACCACTTTATCGGCA
ACTGTATATCCTCTTACTCGGCATTCGAAAAAAGGGAACGAGATGTGCAC
GGTTTTCCATCGTACTTCTGGGGATTCCCTAAGGAAAAGGATCGTAAGCA
TACAAACGTGCACGAGGAGCTGTAAAAGCTTTCTAGACCAT
BS23155.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:52:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| O-fut1-RB | 1209 | CG12366-PB | 1..1209 | 17..1225 | 6030 | 99.9 | Plus |
| O-fut1-RA | 1209 | CG12366-PA | 1..1209 | 17..1225 | 6030 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:52:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| O-fut1-RB | 1570 | CG12366-RB | 34..1242 | 17..1225 | 6030 | 99.9 | Plus |
| O-fut1-RA | 1337 | CG12366-RA | 34..1242 | 17..1225 | 6030 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:52:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14161635..14162726 | 134..1225 | 5445 | 99.9 | Plus |
| 2R | 25286936 | 2R | 14161463..14161581 | 17..135 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:52:17 has no hits.
BS23155.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-18 10:39:56 Download gff for
BS23155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut1-RA | 29..1235 | 17..1223 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:13:55 Download gff for
BS23155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut1-RA | 34..1240 | 17..1223 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:27:52 Download gff for
BS23155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| O-fut1-RA | 34..1240 | 17..1223 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:27:52 Download gff for
BS23155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14161463..14161580 | 17..134 | 100 | -> | Plus |
| 2R | 14161636..14162724 | 135..1223 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:13:55 Download gff for
BS23155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10048968..10049085 | 17..134 | 100 | -> | Plus |
| arm_2R | 10049141..10050229 | 135..1223 | 99 | | Plus |
BS23155.pep Sequence
Translation from 16 to 1224
> BS23155.pep
MQWLKMKLRFVNLILLLISSTCAQLGGDPNGYLTYCPCMGRFGNQADHFL
GSLAFAKALNRTLILPPWVEYRRGELRSRQVPFNTYFEVEPLKEYHRVIT
MADFMWHLADDIWPESERVSFCYKERYSLQQEKNDPDKPNCHAKDGNPFG
PFWDTFHIDFVRSEFYAPLHFDVHHSNEAAKWQTKYPAESYPVLAFTGAP
ASFPVQLENCKLQRYLQWSQRYREASKDFIREQLPRGAFLGIHLRNGIDW
VRACEHVKDSQHLFASPQCLGYKNERGALYPELCMPSKEAIIRQLKRTIK
NVRQTQPDNEIKSVFVASDSNHMIGELNTALSRMGISVHKLPEDDPYLDL
AILGQSNHFIGNCISSYSAFEKRERDVHGFPSYFWGFPKEKDRKHTNVHE
EL*
BS23155.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:26:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| O-fut1-PB | 402 | CG12366-PB | 1..402 | 1..402 | 2201 | 100 | Plus |
| O-fut1-PA | 402 | CG12366-PA | 1..402 | 1..402 | 2201 | 100 | Plus |
