Clone BS23159 Report

Search the DGRC for BS23159

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:231
Well:59
Vector:pDNR-Dual
Associated Gene/TranscriptCG17219-RA
Protein status:BS23159.pep: full length peptide match
Sequenced Size:956

Clone Sequence Records

BS23159.complete Sequence

956 bp assembled on 2011-01-25

GenBank Submission: KX803813

> BS23159.complete
GAAGTTATCAGTCGACATGTTCAAATTTAATTTTGATGTGAAGGCGGAAT
CCTCGGAAGATCCAGAGGCCGTTAAAAATGATATTTTTAGCAAGCAGGAA
AATTCAGAAGAACGTGAGTCGGGTATCACAAAGGATATTGATTGGTACAA
TTCGGAGAAAGTACAACCACTGGATAACCTAATTTCGGCAATGGATTTCT
ATGAGCTTAACGCCAAGGAAATGGAGGTGGGAAAGATGACGATAAAACAT
CTTGTGGCCGGGTTTCTGCTGGAGGATTTAAAGGAGCAATCCCACTTGGT
AAACCTGGATCTCAGGAAGTCTGAGGAAAATCATTCAGATCTGATTTCCG
GTGTCTACGAGGGCGGTGCTAAAATATGGGAATGCACTGAAGATCTTCTA
CTATATCTATCCGAAAAGTACGAGGACTCATTCTGGAAGGAGAAAAGAGT
CCTAGATTTGGGATGTGGCTGCGGATTGCTGGGTATATATGCTATGAAAC
ACGGCGCACGGGTGGATTTTCAGGACTACAACAAAGATGTGCTGGAATAC
ATAACATATCCAAATATCCTGCTAAATTTGGACGACTCTTTATCTGAAGA
TGAAAAGCTGAAATTTTTAGACAACAGTACAACCTTATATTCTGGAGATT
GGTCTCATTTTGCTGAACTATCAAGGGATGTGGCGAAATACGATCTAATA
CTTACCTCTGAGACTATATACAATATTGCAAATCAGCAAAAGCTCTTGGA
TACCTTTGCTGGTCGCTTAAAATCCGATGGAGTCATTTTGGTTGCCGCAA
AATCTCATTATTTTGGAGTTGGTGGCGGCCTGGAACAGTTTTCAGAGAAC
ATTAGGCTGGGAAATGTTTTCCAAAGTGAGAGTGTTTGGCAGGCAGACGA
AAACTTAAAAAGAGGAATCTTGCAATTGAAATTTAAATAAAAGCTTTCTA
GACCAT

BS23159.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:28:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG17219-RA 924 CG17219-PA 1..924 17..940 4605 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:28:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG17219-RA 1253 CG17219-RA 108..1034 16..942 4620 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:28:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3029419..3029932 16..529 2555 99.8 Plus
2L 23513712 2L 3029985..3030397 530..942 2065 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:28:01 has no hits.

BS23159.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:18 Download gff for BS23159.complete
Subject Subject Range Query Range Percent Splice Strand
CG17219-RA 116..1032 22..938 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:28 Download gff for BS23159.complete
Subject Subject Range Query Range Percent Splice Strand
CG17219-RA 114..1030 22..938 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:57 Download gff for BS23159.complete
Subject Subject Range Query Range Percent Splice Strand
CG17219-RA 114..1030 22..938 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:57 Download gff for BS23159.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3029425..3029932 22..529 99 -> Plus
2L 3029985..3030393 530..938 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:28 Download gff for BS23159.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3029425..3029932 22..529 99 -> Plus
arm_2L 3029985..3030393 530..938 100   Plus

BS23159.pep Sequence

Translation from 16 to 939

> BS23159.pep
MFKFNFDVKAESSEDPEAVKNDIFSKQENSEERESGITKDIDWYNSEKVQ
PLDNLISAMDFYELNAKEMEVGKMTIKHLVAGFLLEDLKEQSHLVNLDLR
KSEENHSDLISGVYEGGAKIWECTEDLLLYLSEKYEDSFWKEKRVLDLGC
GCGLLGIYAMKHGARVDFQDYNKDVLEYITYPNILLNLDDSLSEDEKLKF
LDNSTTLYSGDWSHFAELSRDVAKYDLILTSETIYNIANQQKLLDTFAGR
LKSDGVILVAAKSHYFGVGGGLEQFSENIRLGNVFQSESVWQADENLKRG
ILQLKFK*

BS23159.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:47:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG17219-PA 307 CG17219-PA 1..307 1..307 1594 100 Plus