BS23159.complete Sequence
956 bp assembled on 2011-01-25
GenBank Submission: KX803813
> BS23159.complete
GAAGTTATCAGTCGACATGTTCAAATTTAATTTTGATGTGAAGGCGGAAT
CCTCGGAAGATCCAGAGGCCGTTAAAAATGATATTTTTAGCAAGCAGGAA
AATTCAGAAGAACGTGAGTCGGGTATCACAAAGGATATTGATTGGTACAA
TTCGGAGAAAGTACAACCACTGGATAACCTAATTTCGGCAATGGATTTCT
ATGAGCTTAACGCCAAGGAAATGGAGGTGGGAAAGATGACGATAAAACAT
CTTGTGGCCGGGTTTCTGCTGGAGGATTTAAAGGAGCAATCCCACTTGGT
AAACCTGGATCTCAGGAAGTCTGAGGAAAATCATTCAGATCTGATTTCCG
GTGTCTACGAGGGCGGTGCTAAAATATGGGAATGCACTGAAGATCTTCTA
CTATATCTATCCGAAAAGTACGAGGACTCATTCTGGAAGGAGAAAAGAGT
CCTAGATTTGGGATGTGGCTGCGGATTGCTGGGTATATATGCTATGAAAC
ACGGCGCACGGGTGGATTTTCAGGACTACAACAAAGATGTGCTGGAATAC
ATAACATATCCAAATATCCTGCTAAATTTGGACGACTCTTTATCTGAAGA
TGAAAAGCTGAAATTTTTAGACAACAGTACAACCTTATATTCTGGAGATT
GGTCTCATTTTGCTGAACTATCAAGGGATGTGGCGAAATACGATCTAATA
CTTACCTCTGAGACTATATACAATATTGCAAATCAGCAAAAGCTCTTGGA
TACCTTTGCTGGTCGCTTAAAATCCGATGGAGTCATTTTGGTTGCCGCAA
AATCTCATTATTTTGGAGTTGGTGGCGGCCTGGAACAGTTTTCAGAGAAC
ATTAGGCTGGGAAATGTTTTCCAAAGTGAGAGTGTTTGGCAGGCAGACGA
AAACTTAAAAAGAGGAATCTTGCAATTGAAATTTAAATAAAAGCTTTCTA
GACCAT
BS23159.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:28:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17219-RA | 924 | CG17219-PA | 1..924 | 17..940 | 4605 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:28:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17219-RA | 1253 | CG17219-RA | 108..1034 | 16..942 | 4620 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:28:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3029419..3029932 | 16..529 | 2555 | 99.8 | Plus |
2L | 23513712 | 2L | 3029985..3030397 | 530..942 | 2065 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:28:01 has no hits.
BS23159.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:18 Download gff for
BS23159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17219-RA | 116..1032 | 22..938 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:28 Download gff for
BS23159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17219-RA | 114..1030 | 22..938 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:57 Download gff for
BS23159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17219-RA | 114..1030 | 22..938 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:57 Download gff for
BS23159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3029425..3029932 | 22..529 | 99 | -> | Plus |
2L | 3029985..3030393 | 530..938 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:28 Download gff for
BS23159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3029425..3029932 | 22..529 | 99 | -> | Plus |
arm_2L | 3029985..3030393 | 530..938 | 100 | | Plus |
BS23159.pep Sequence
Translation from 16 to 939
> BS23159.pep
MFKFNFDVKAESSEDPEAVKNDIFSKQENSEERESGITKDIDWYNSEKVQ
PLDNLISAMDFYELNAKEMEVGKMTIKHLVAGFLLEDLKEQSHLVNLDLR
KSEENHSDLISGVYEGGAKIWECTEDLLLYLSEKYEDSFWKEKRVLDLGC
GCGLLGIYAMKHGARVDFQDYNKDVLEYITYPNILLNLDDSLSEDEKLKF
LDNSTTLYSGDWSHFAELSRDVAKYDLILTSETIYNIANQQKLLDTFAGR
LKSDGVILVAAKSHYFGVGGGLEQFSENIRLGNVFQSESVWQADENLKRG
ILQLKFK*
BS23159.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:47:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17219-PA | 307 | CG17219-PA | 1..307 | 1..307 | 1594 | 100 | Plus |