BS23172.complete Sequence
1283 bp assembled on 2011-02-18
GenBank Submission: KX806321
> BS23172.complete
GAAGTTATCAGTCGACATGAACTTCTACGACGAGGAGATCACAATCGGCG
GACCCGACTCCAAGCACCTGAGCAGTGTTCAAATGGAGCCCCGAAATGGA
GGAACAGGCGGTGGCAGAGGTGGTGCTGGCGGTGGTGGACCAGGAGCAGT
GGGCGGAGAAGGAGCTGTACGAAGAGCAGCCGCAGGCAGGCACCGTCGAA
TGTTCCAAAACAACTCTACTGATGACGATGGTCTGCTGCAGGACATCATT
GATCACGATGACGAGGCGGAGGACAGCGAGGATGACGATGACAGCGAGAT
GCAGCTGCCCCAGGGCATGACCATGGGCGTGGGAATGACGGGTCTGGTGC
CCGGGCCGAACATGCAAAAGCGGCCGGGAAGCAACCGAAGTTCCAAGCAA
GTACCGGATGACACCCTGAGCTCGGGCAGCGAGGAGGCCGCAATGGGTGG
CAGAATGGGATCCGGAGGAGCAAGAGGCGGAGCCAAGCTACCACATCAAA
AGCTAACGCTTCCCATGAGGGGAAGTGCTAGTGGAGCAGGAAGATCTAAG
CGGCAGGATGATCAATCCTTTATTATGAGTGCCGACAAATGGGAGGATCT
GTCCGTGCCCGGAGAACTCAAGGAACTCTTTCCCTACATCGTCAAATACA
CCCCGCAAACGATCGATACTCCGTTTCACCTGCAACCTTTCATCCCCGAG
TTTGTGCCCGCTGTGGGTGATGTGGATGCCCTTCTGAAAGTCCAGGCTCC
GCCTCTTTTGCAGCCCCAACGCCAGAAGGATCTGAACGATCACTTGGAGA
AATTGGGCTTATGGTTGCTCGATGAGCCCTCTGGCGCTCAAAGTGAGCCC
AGTCTGCTGAATATGAAACTTCGGTCGGTACTGAGTGGCAGCATGGGGCG
AAATCCGCGTCACGCCTCCTCCGCATCACTGGTTCCCACCGCCCGATCGG
GCAAGGATATAGAGAAGTGGATCACTGAGGTGGAACAAGTGCATATGACT
CAGTCAATGTACGATGTCCAGCCCAGAAAGGACATAGATGCCCTCCTGGA
GGATTGGCCGAGATCCTTTGGCGATGAACAAACCATTAATGCCCTTGATC
AGGCCTACAGATCCTGTCTGCAGCAGAACATTTCTGTAGCGGAATACGTG
GGAGTTCTTTGCGAGAGATTCGGAGTGGAAGGACCTTTGGAGTCGCAGGC
GGACTACATCCATAATGTCCAGACACTCTTTGCCCTCTACTTGGCCGCCA
GTCAGGCGTGGGAATAAAAGCTTTCTAGACCAT
BS23172.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:53:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15161-RA | 1251 | CG15161-PA | 1..1251 | 17..1267 | 6255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:53:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15161-RA | 1643 | CG15161-RA | 287..1538 | 16..1267 | 6260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:53:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18614444..18615509 | 1267..202 | 5330 | 100 | Minus |
| 2L | 23513712 | 2L | 18615634..18615820 | 202..16 | 935 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:53:37 has no hits.
BS23172.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-18 10:39:57 Download gff for
BS23172.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15161-RA | 249..1497 | 17..1265 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:14:02 Download gff for
BS23172.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15161-RA | 288..1536 | 17..1265 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:28:12 Download gff for
BS23172.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15161-RA | 288..1536 | 17..1265 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:28:12 Download gff for
BS23172.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18614446..18615508 | 203..1265 | 100 | <- | Minus |
| 2L | 18615634..18615819 | 17..202 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:14:02 Download gff for
BS23172.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18614446..18615508 | 203..1265 | 100 | <- | Minus |
| arm_2L | 18615634..18615819 | 17..202 | 100 | | Minus |
BS23172.pep Sequence
Translation from 16 to 1266
> BS23172.pep
MNFYDEEITIGGPDSKHLSSVQMEPRNGGTGGGRGGAGGGGPGAVGGEGA
VRRAAAGRHRRMFQNNSTDDDGLLQDIIDHDDEAEDSEDDDDSEMQLPQG
MTMGVGMTGLVPGPNMQKRPGSNRSSKQVPDDTLSSGSEEAAMGGRMGSG
GARGGAKLPHQKLTLPMRGSASGAGRSKRQDDQSFIMSADKWEDLSVPGE
LKELFPYIVKYTPQTIDTPFHLQPFIPEFVPAVGDVDALLKVQAPPLLQP
QRQKDLNDHLEKLGLWLLDEPSGAQSEPSLLNMKLRSVLSGSMGRNPRHA
SSASLVPTARSGKDIEKWITEVEQVHMTQSMYDVQPRKDIDALLEDWPRS
FGDEQTINALDQAYRSCLQQNISVAEYVGVLCERFGVEGPLESQADYIHN
VQTLFALYLAASQAWE*
BS23172.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:26:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15161-PA | 416 | CG15161-PA | 1..416 | 1..416 | 2180 | 100 | Plus |
