BS23178.complete Sequence
2024 bp assembled on 2011-02-18
GenBank Submission: KX802015
> BS23178.complete
GAAGTTATCAGTCGACATGGGCAGCTCGCATTTTTCGGTGGCGATGACGC
AGTGCGTCTTCCTCGTTGTCGTATCGCAGATTTTGTCACACGTGCGGGCA
GCTGGCGATGCGATGTCTTCCGCCAACGAATCAATATCGTTGCCACCGGC
TTGCGTCATTCGGGCAACGCTCTATAAGACATCTTCGTCGGAAAGGAGTC
AAAACGATTTTGGGCTGCCTCTGGCAATAGATTGCAGTGAGAACAGTAGC
ATGGGGATGAATTACTTCGATTTGGGCGCCCAAAGAGTGGCCGGAAAGAG
GCACGTTTCGCTGGATGGCTTTCAGACACCACCCTTGGGAATCTCGAGCT
ATGGCTTGGAGTACCTGGACAATTGTGTGGATCTGGAAAGTGTCGAGATC
CAACGTTTTGTGGGCGATGCCACCCTGAAACTGAGCTGTGGAGGAGCTCT
GATCCCCAACCTGACCGCAGTATCTTTCAGATACAACGAGCTGGGTACAT
TGAGTGGAGAAACTATCCAGGACTTGCCACATCTTAAAATACTACACTTG
CAACAGAACTCACTGAGGTACCTAGAATACTTTAAGGAGCATTCTGACTT
GGAAGAACTTCTGATACAGGACGAACGGGATTTGGTCTTGAGGTTTAATG
AAATCCTAAATCAGCTGCCAGAGCTGAGAAGGCTTAGTTTGCGAAATGTA
GAAAAGATTGAGGACCAATTCCTTAGAATCTTACCAGAAAACTTAACGGA
TCTGATAATCGAGAATACGCCCATTCAACCAGGAGTTTTGTACTTGACCG
AAGGCGTAGCGAAACTGGTTAACGTAACCATCACAAATTGCCAGCTGAAG
GGATTTGCATTGCAACCTGCACACAATTTGGATATTATGTATCTAAACCT
AAGTGGCAATGCCATATCTTCGTTGAACATAAGTTTTGAAAGTGGACCAA
GCACCCTACTGACCTTGGATTTGAGCCGAAATAGATTGGAGCACTTGAAT
TTCACCTGGTTCTATAGAACCACCAGTCTTCGTAGTCTTCACCTGCAGGA
AAACCACTTCCATTCATTGTCCCTCTTCCAATTGGGCTTTATTTCCTCAG
CGAGCATTCACCACATTGACCTGAGATCCAATGAATTGATGAGCTTCCGG
GATACAGAAAATGCTGATCTACCGTCCTGGAACCCACAGCTTCGAATTTC
CATCGATGACAATCCTTGGAGCTGCCAGTGGATGCTGAATTTCTCGCACA
TGCAACCTCAACTCTTTAGACTATTCCAGTACTCCAAGTATATATCCCAC
ATCAATATAAATGGCCTGAGTTGCACACCGCAAGAGCCGCCCTCGGAAGA
ACCGCCCAAGGTGCGAAGAATCATGCACGTGAGGATCAATGGGACAGACT
CTTCGATTCCCGTGCCACATCCACATGGAAATGTTTCCAGTTTCACTGTC
CTTTACGGCAACCCCGTAGAACTGCACCGAAGTCAGCGATCTTTAGCCTT
GATAATCGTGTTTATGTTGCCCCTGGGCATCGCATTCCTCTTCCTGTTGC
TATATCTATACCTCCATTGCGAGCGGCTCTTCCACTTGTCCTATTACGCC
TCGGGATTGCCCTGTTTTGGTGGCGAAAAATCATCCAGTGGGCCGAGGTT
TGTGGATCATGTGGACATAGTGCGCTATCCCATTGCTAATGGCGGTTCCA
GTTGCCCAGTGGATGTGGAAACCGAATTGCCAGATGGATACGAGACTCCT
GTAAGTGGAGGTACCTCGATTTGCAATTGCACTGGTCACAGAGAATCCAC
CTGCTCGAGGACCCATCATGTCACCTACGAGTCCTTACCAGCTGAGCTGC
CCTATCAACTGTACGCAGAGATCAAGGAGCAGGCGGATGAGAATGGGGAT
GCGGATGAGGTGCTGGCCGTGACTACCGGCCCTACGGCTCCCATCTACGA
TCATCTGTCGTTTGTGGAGGAGATGCCAAAACTGGATGAACTGAGAGATA
TATCCTAGAAGCTTTCTAGACCAT
BS23178.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:40:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8852-RA | 1992 | CG8852-PA | 1..1992 | 17..2008 | 9960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8852-RA | 2398 | CG8852-RA | 79..2070 | 17..2008 | 9960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3525209..3527200 | 17..2008 | 9960 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:40:21 has no hits.
BS23178.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-09 09:38:00 Download gff for
BS23178.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8852-RA | 77..2068 | 17..2008 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:03:31 Download gff for
BS23178.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8852-RA | 79..2070 | 17..2008 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:46:41 Download gff for
BS23178.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8852-RA | 79..2070 | 17..2008 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:46:41 Download gff for
BS23178.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3525209..3527200 | 17..2008 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:03:31 Download gff for
BS23178.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3525209..3527200 | 17..2008 | 100 | | Plus |
BS23178.pep Sequence
Translation from 16 to 2007
> BS23178.pep
MGSSHFSVAMTQCVFLVVVSQILSHVRAAGDAMSSANESISLPPACVIRA
TLYKTSSSERSQNDFGLPLAIDCSENSSMGMNYFDLGAQRVAGKRHVSLD
GFQTPPLGISSYGLEYLDNCVDLESVEIQRFVGDATLKLSCGGALIPNLT
AVSFRYNELGTLSGETIQDLPHLKILHLQQNSLRYLEYFKEHSDLEELLI
QDERDLVLRFNEILNQLPELRRLSLRNVEKIEDQFLRILPENLTDLIIEN
TPIQPGVLYLTEGVAKLVNVTITNCQLKGFALQPAHNLDIMYLNLSGNAI
SSLNISFESGPSTLLTLDLSRNRLEHLNFTWFYRTTSLRSLHLQENHFHS
LSLFQLGFISSASIHHIDLRSNELMSFRDTENADLPSWNPQLRISIDDNP
WSCQWMLNFSHMQPQLFRLFQYSKYISHININGLSCTPQEPPSEEPPKVR
RIMHVRINGTDSSIPVPHPHGNVSSFTVLYGNPVELHRSQRSLALIIVFM
LPLGIAFLFLLLYLYLHCERLFHLSYYASGLPCFGGEKSSSGPRFVDHVD
IVRYPIANGGSSCPVDVETELPDGYETPVSGGTSICNCTGHRESTCSRTH
HVTYESLPAELPYQLYAEIKEQADENGDADEVLAVTTGPTAPIYDHLSFV
EEMPKLDELRDIS*
BS23178.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:07:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8852-PA | 663 | CG8852-PA | 1..663 | 1..663 | 3463 | 100 | Plus |