Clone BS23178 Report

Search the DGRC for BS23178

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:231
Well:78
Vector:pDNR-Dual
Associated Gene/TranscriptCG8852-RA
Protein status:BS23178.pep: full length peptide match
Sequenced Size:2024

Clone Sequence Records

BS23178.complete Sequence

2024 bp assembled on 2011-02-18

GenBank Submission: KX802015

> BS23178.complete
GAAGTTATCAGTCGACATGGGCAGCTCGCATTTTTCGGTGGCGATGACGC
AGTGCGTCTTCCTCGTTGTCGTATCGCAGATTTTGTCACACGTGCGGGCA
GCTGGCGATGCGATGTCTTCCGCCAACGAATCAATATCGTTGCCACCGGC
TTGCGTCATTCGGGCAACGCTCTATAAGACATCTTCGTCGGAAAGGAGTC
AAAACGATTTTGGGCTGCCTCTGGCAATAGATTGCAGTGAGAACAGTAGC
ATGGGGATGAATTACTTCGATTTGGGCGCCCAAAGAGTGGCCGGAAAGAG
GCACGTTTCGCTGGATGGCTTTCAGACACCACCCTTGGGAATCTCGAGCT
ATGGCTTGGAGTACCTGGACAATTGTGTGGATCTGGAAAGTGTCGAGATC
CAACGTTTTGTGGGCGATGCCACCCTGAAACTGAGCTGTGGAGGAGCTCT
GATCCCCAACCTGACCGCAGTATCTTTCAGATACAACGAGCTGGGTACAT
TGAGTGGAGAAACTATCCAGGACTTGCCACATCTTAAAATACTACACTTG
CAACAGAACTCACTGAGGTACCTAGAATACTTTAAGGAGCATTCTGACTT
GGAAGAACTTCTGATACAGGACGAACGGGATTTGGTCTTGAGGTTTAATG
AAATCCTAAATCAGCTGCCAGAGCTGAGAAGGCTTAGTTTGCGAAATGTA
GAAAAGATTGAGGACCAATTCCTTAGAATCTTACCAGAAAACTTAACGGA
TCTGATAATCGAGAATACGCCCATTCAACCAGGAGTTTTGTACTTGACCG
AAGGCGTAGCGAAACTGGTTAACGTAACCATCACAAATTGCCAGCTGAAG
GGATTTGCATTGCAACCTGCACACAATTTGGATATTATGTATCTAAACCT
AAGTGGCAATGCCATATCTTCGTTGAACATAAGTTTTGAAAGTGGACCAA
GCACCCTACTGACCTTGGATTTGAGCCGAAATAGATTGGAGCACTTGAAT
TTCACCTGGTTCTATAGAACCACCAGTCTTCGTAGTCTTCACCTGCAGGA
AAACCACTTCCATTCATTGTCCCTCTTCCAATTGGGCTTTATTTCCTCAG
CGAGCATTCACCACATTGACCTGAGATCCAATGAATTGATGAGCTTCCGG
GATACAGAAAATGCTGATCTACCGTCCTGGAACCCACAGCTTCGAATTTC
CATCGATGACAATCCTTGGAGCTGCCAGTGGATGCTGAATTTCTCGCACA
TGCAACCTCAACTCTTTAGACTATTCCAGTACTCCAAGTATATATCCCAC
ATCAATATAAATGGCCTGAGTTGCACACCGCAAGAGCCGCCCTCGGAAGA
ACCGCCCAAGGTGCGAAGAATCATGCACGTGAGGATCAATGGGACAGACT
CTTCGATTCCCGTGCCACATCCACATGGAAATGTTTCCAGTTTCACTGTC
CTTTACGGCAACCCCGTAGAACTGCACCGAAGTCAGCGATCTTTAGCCTT
GATAATCGTGTTTATGTTGCCCCTGGGCATCGCATTCCTCTTCCTGTTGC
TATATCTATACCTCCATTGCGAGCGGCTCTTCCACTTGTCCTATTACGCC
TCGGGATTGCCCTGTTTTGGTGGCGAAAAATCATCCAGTGGGCCGAGGTT
TGTGGATCATGTGGACATAGTGCGCTATCCCATTGCTAATGGCGGTTCCA
GTTGCCCAGTGGATGTGGAAACCGAATTGCCAGATGGATACGAGACTCCT
GTAAGTGGAGGTACCTCGATTTGCAATTGCACTGGTCACAGAGAATCCAC
CTGCTCGAGGACCCATCATGTCACCTACGAGTCCTTACCAGCTGAGCTGC
CCTATCAACTGTACGCAGAGATCAAGGAGCAGGCGGATGAGAATGGGGAT
GCGGATGAGGTGCTGGCCGTGACTACCGGCCCTACGGCTCCCATCTACGA
TCATCTGTCGTTTGTGGAGGAGATGCCAAAACTGGATGAACTGAGAGATA
TATCCTAGAAGCTTTCTAGACCAT

BS23178.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:40:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG8852-RA 1992 CG8852-PA 1..1992 17..2008 9960 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG8852-RA 2398 CG8852-RA 79..2070 17..2008 9960 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:20
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3525209..3527200 17..2008 9960 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:40:21 has no hits.

BS23178.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-09 09:38:00 Download gff for BS23178.complete
Subject Subject Range Query Range Percent Splice Strand
CG8852-RA 77..2068 17..2008 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:03:31 Download gff for BS23178.complete
Subject Subject Range Query Range Percent Splice Strand
CG8852-RA 79..2070 17..2008 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:46:41 Download gff for BS23178.complete
Subject Subject Range Query Range Percent Splice Strand
CG8852-RA 79..2070 17..2008 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:46:41 Download gff for BS23178.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3525209..3527200 17..2008 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:03:31 Download gff for BS23178.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3525209..3527200 17..2008 100   Plus

BS23178.pep Sequence

Translation from 16 to 2007

> BS23178.pep
MGSSHFSVAMTQCVFLVVVSQILSHVRAAGDAMSSANESISLPPACVIRA
TLYKTSSSERSQNDFGLPLAIDCSENSSMGMNYFDLGAQRVAGKRHVSLD
GFQTPPLGISSYGLEYLDNCVDLESVEIQRFVGDATLKLSCGGALIPNLT
AVSFRYNELGTLSGETIQDLPHLKILHLQQNSLRYLEYFKEHSDLEELLI
QDERDLVLRFNEILNQLPELRRLSLRNVEKIEDQFLRILPENLTDLIIEN
TPIQPGVLYLTEGVAKLVNVTITNCQLKGFALQPAHNLDIMYLNLSGNAI
SSLNISFESGPSTLLTLDLSRNRLEHLNFTWFYRTTSLRSLHLQENHFHS
LSLFQLGFISSASIHHIDLRSNELMSFRDTENADLPSWNPQLRISIDDNP
WSCQWMLNFSHMQPQLFRLFQYSKYISHININGLSCTPQEPPSEEPPKVR
RIMHVRINGTDSSIPVPHPHGNVSSFTVLYGNPVELHRSQRSLALIIVFM
LPLGIAFLFLLLYLYLHCERLFHLSYYASGLPCFGGEKSSSGPRFVDHVD
IVRYPIANGGSSCPVDVETELPDGYETPVSGGTSICNCTGHRESTCSRTH
HVTYESLPAELPYQLYAEIKEQADENGDADEVLAVTTGPTAPIYDHLSFV
EEMPKLDELRDIS*

BS23178.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:07:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG8852-PA 663 CG8852-PA 1..663 1..663 3463 100 Plus