BS23185.complete Sequence
1541 bp assembled on 2011-02-18
GenBank Submission: KX803623
> BS23185.complete
GAAGTTATCAGTCGACATGTCGCTGTTACTAACGTTGATCGCACTTCTAG
TGTCACTGCTTTTGTTCATGGCCCGCCGACGTCATGGATACTGGCAGAGG
CGGGGTATTCCGCACGATGTGCCCCATCCAATATACGGAAACATGAAGGA
CTGGCCCAAGAAGCGACACATTGCGATGATCTTCCGGGACTACTATACAA
AGTACAAACGTTCCGTTTATCCGTTTGCCGGGTTCTACTTCTTTTTCACC
CGGTCTGCTGTCATCACCGACTTGGAATTGGTCAAGAGGGTGCTGATCAA
GGACTTCAATCACTTTGAGAATCGAGGAATTTTCTACAATGAGATCGATG
ATCCGCTGTCGGCCACCTTGTTCAGCATCGAGGGTCAGAAGTGGCGTCAT
CTGAGGCACAAACTGACACCCACTTTTACGTCCGGCAAAATGAAGAACAT
GTTTCCGATTATTGTGAAGGTTGGGGAGGAAATGGAGAAGATTTTCAGTG
CTAAAACCACCACAGGTGAAGGTCAAGTTCTGGAAATTGTGGATCTGGTG
GCTCGATATACGGCTGACGTAATCGGTAATTGCGCCTTCGGTTTAAATTG
CAATAGTTTGCAAAACCCGAATGCAGAGTTTGTGACAATCGGAAAAAGGG
CGATCATAGAACGTCGTTATGGAGGACTATTGGATTTCCTGATATTCGGA
TTTCCCAAACTTTCCCGCCGCCTGCGGCTTAAACTAAACGTGCAGGATGT
TGAGGACTTTTACACTAGCATTGTTAGGAATACTATCGACTACCGATTGA
GGACCAACGAGAAGCGTCACGACTTCATGGACAGTTTAATCGAAATGTAC
GAGAAGGAGCAGGCCGGAAACACTGAGGATGGCCTGTCCTTCAACGAGAT
CTTGGCACAGGCCTTTATTTTCTTTGTGGCTGGCTTCGAGACCAGCTCGA
CGACCATGGGATTTGCCCTGTACGAGCTCGCCCTCGATCAGGATATTCAG
GATCAACTTAGGGCGGAGATCAACAATGTTCTGAGCAAACACAACAACGA
GTTTACCTACGAGGGAATCAAAGAGATGAAGTATCTGGAGCAGGTCGTCA
TGGAAACCCTTCGCAAGTATCCAGTTCTGGCGCATCTAACGCGAATGACC
CAGACAGATTTTTCGCCTGAAGATCCTAAATACTTTATTGCCAAGGGAAC
CACTGTTGTGATCCCAGCTCTTGGTATTCACTATGATCCGGAAATCTATC
CCGAACCGGAGAAGTTCAAGCCGGAGCGATTTACGGATGAGGCGATCGCC
GCGAGACCCTCGTGCACCTGGCTGCCGTTTGGAGAAGGTCCCCGGAACTG
CATCGGTCTTCGGTTTGGACTGATGCAGGCCTGCGTGGGATTGGCCTATC
TAATCCGAGGCTATAAGTTCAGTGTGTCCACAGAAACACAAATTCCCATG
AAGTTTGTCGTGAAAAGCATTCTTCTGTCTGCTGAGAATGGCATTCACCT
TAAAGTTGAGAAGCTTTCCAAATGAAAGCTTTCTAGACCAT
BS23185.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:01:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a23-RA | 1509 | CG10242-PA | 1..1509 | 17..1525 | 7545 | 100 | Plus |
| Cyp6a17-RB | 1506 | CG10241-PB | 34..1504 | 53..1523 | 3080 | 80.6 | Plus |
| Cyp6a17-RA | 1506 | CG10241-PA | 34..1504 | 53..1523 | 3080 | 80.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:01:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a23-RA | 1761 | CG10242-RA | 33..1541 | 17..1525 | 7545 | 100 | Plus |
| Cyp6a17-RB | 1727 | CG10241-RB | 61..1531 | 53..1523 | 3080 | 80.6 | Plus |
| Cyp6a17-RA | 1546 | CG10241-RA | 61..1531 | 53..1523 | 3080 | 80.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:01:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14875861..14876947 | 17..1103 | 5435 | 100 | Plus |
| 2R | 25286936 | 2R | 14877012..14877434 | 1103..1525 | 2115 | 100 | Plus |
| 2R | 25286936 | 2R | 14874013..14875063 | 53..1103 | 2015 | 79.4 | Plus |
| 2R | 25286936 | 2R | 14875123..14875543 | 1103..1523 | 1070 | 83.6 | Plus |
| 2R | 25286936 | 2R | 14882993..14883125 | 879..1011 | 260 | 79.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:01:33 has no hits.
BS23185.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-18 10:39:59 Download gff for
BS23185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a23-RA | 29..1536 | 17..1524 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:14:52 Download gff for
BS23185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a23-RA | 33..1540 | 17..1524 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:11:00 Download gff for
BS23185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a23-RA | 33..1540 | 17..1524 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:11:00 Download gff for
BS23185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14875861..14876947 | 17..1103 | 100 | -> | Plus |
| 2R | 14877013..14877433 | 1104..1524 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:14:52 Download gff for
BS23185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10763366..10764452 | 17..1103 | 100 | -> | Plus |
| arm_2R | 10764518..10764938 | 1104..1524 | 100 | | Plus |
BS23185.pep Sequence
Translation from 16 to 1524
> BS23185.pep
MSLLLTLIALLVSLLLFMARRRHGYWQRRGIPHDVPHPIYGNMKDWPKKR
HIAMIFRDYYTKYKRSVYPFAGFYFFFTRSAVITDLELVKRVLIKDFNHF
ENRGIFYNEIDDPLSATLFSIEGQKWRHLRHKLTPTFTSGKMKNMFPIIV
KVGEEMEKIFSAKTTTGEGQVLEIVDLVARYTADVIGNCAFGLNCNSLQN
PNAEFVTIGKRAIIERRYGGLLDFLIFGFPKLSRRLRLKLNVQDVEDFYT
SIVRNTIDYRLRTNEKRHDFMDSLIEMYEKEQAGNTEDGLSFNEILAQAF
IFFVAGFETSSTTMGFALYELALDQDIQDQLRAEINNVLSKHNNEFTYEG
IKEMKYLEQVVMETLRKYPVLAHLTRMTQTDFSPEDPKYFIAKGTTVVIP
ALGIHYDPEIYPEPEKFKPERFTDEAIAARPSCTWLPFGEGPRNCIGLRF
GLMQACVGLAYLIRGYKFSVSTETQIPMKFVVKSILLSAENGIHLKVEKL
SK*
BS23185.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:27:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a23-PA | 502 | CG10242-PA | 1..502 | 1..502 | 2622 | 100 | Plus |
| Cyp6a17-PB | 501 | CG10241-PB | 2..501 | 3..502 | 2283 | 84.4 | Plus |
| Cyp6a17-PA | 501 | CG10241-PA | 2..501 | 3..502 | 2283 | 84.4 | Plus |
| Cyp6a20-PB | 501 | CG10245-PB | 1..501 | 4..500 | 1460 | 54.8 | Plus |
| Cyp6a19-PA | 503 | CG10243-PA | 1..500 | 1..500 | 1369 | 50.1 | Plus |
