Clone BS23201 Report

Search the DGRC for BS23201

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:232
Well:1
Vector:pDNR-Dual
Associated Gene/TranscriptCOQ7-RA
Protein status:BS23201.pep: full length peptide match
Sequenced Size:692

Clone Sequence Records

BS23201.complete Sequence

692 bp assembled on 2011-01-25

GenBank Submission: KX803314

> BS23201.complete
GAAGTTATCAGTCGACATGAATGGAATGCTGAGAAGAGGTCTTAGCCGGC
CCGAGCCACGCCTGCTCTCCAAGCGCTATCTAAGCTCAGCAACTGGAGGA
GGATCAGCAGGCACGACCGAAGGAGGCAGCTCTGAAACCACCCCGCTGCG
TCCACGTCCAAATGCGCTCACAGATGAGATTATACGCGTCGATCATGCCG
GCGAATTGGGAGCAGATCGCATTTACGCCGGGCAAATGGCCATTCTGGGC
AACGGACCGCTGGGCAAGACCATCGGACACATGTGGGAGCAGGAGAAAGA
GCATCGTAAACAGTTCGAGCAGCTCATTCAACAGCACCGCGTGCGTCCAA
CGATCATGACGCCAATTTGGAACGTGGCCGGATTTGTGCTGGGCGCCGGA
ACCGCCCTCATGGGCGAAAAGGCAGCCATGGCCTGCACGGTGGCAGTGGA
GACGGTGATCGTAGAACACTACAATGACCAGCTGCGTCAGATAATGGAGG
CACCGAACCCGGATAAGGAGCTGTTGGCCACCATCACCAAGTTCCGGGAC
GAGGAGCAGGAGCACCACGACACGGGCATTGATCACGGTGCCGAGCAAGC
GCCCTTTTACCAGGCCATGACCGAGGTAATCAAGTTTGGCTGCAAGACGG
CTATTGCCATCTCGAAGAAGATCTAGAAGCTTTCTAGACCAT

BS23201.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:29:05
Subject Length Description Subject Range Query Range Score Percent Strand
COQ7-RA 660 CG14437-PA 1..660 17..676 3300 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:29:06
Subject Length Description Subject Range Query Range Score Percent Strand
COQ7-RA 899 CG14437-RA 146..805 17..676 3300 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:29:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6772227..6772724 21..518 2490 100 Plus
X 23542271 X 6772785..6772945 516..676 805 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:29:04 has no hits.

BS23201.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:27 Download gff for BS23201.complete
Subject Subject Range Query Range Percent Splice Strand
COQ7-RA 135..794 17..676 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:58 Download gff for BS23201.complete
Subject Subject Range Query Range Percent Splice Strand
COQ7-RA 146..805 17..676 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:05:22 Download gff for BS23201.complete
Subject Subject Range Query Range Percent Splice Strand
COQ7-RA 146..805 17..676 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:05:22 Download gff for BS23201.complete
Subject Subject Range Query Range Percent Splice Strand
X 6772225..6772723 17..517 99 -> Plus
X 6772787..6772945 518..676 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:58 Download gff for BS23201.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6666258..6666756 17..517 99 -> Plus
arm_X 6666820..6666978 518..676 100   Plus

BS23201.pep Sequence

Translation from 16 to 675

> BS23201.pep
MNGMLRRGLSRPEPRLLSKRYLSSATGGGSAGTTEGGSSETTPLRPRPNA
LTDEIIRVDHAGELGADRIYAGQMAILGNGPLGKTIGHMWEQEKEHRKQF
EQLIQQHRVRPTIMTPIWNVAGFVLGAGTALMGEKAAMACTVAVETVIVE
HYNDQLRQIMEAPNPDKELLATITKFRDEEQEHHDTGIDHGAEQAPFYQA
MTEVIKFGCKTAIAISKKI*

BS23201.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:47:46
Subject Length Description Subject Range Query Range Score Percent Strand
COQ7-PA 219 CG14437-PA 1..219 1..219 1140 100 Plus