BS23236.complete Sequence
1415 bp assembled on 2011-01-25
GenBank Submission: KX804544
> BS23236.complete
GAAGTTATCAGTCCCCATGGCAAAAAATCCAAAAAAGGAGGAGGACGGCG
GTAACGACTGGGCCCAAAGTGACGAGGACGACAACTGGGACGATTGGGGC
GATGACGATGACAAGTTCGTTCACGTGGAGAAGGAACAGCAGCCACAGGA
GAAAGTCTCGAGCAGAAACGACGCAAAAGGAACGGCGGAAAATCAGGAAA
AGCTGGAAACTCCCAGAATTTCTGCTCCAGCAACAGCATCCGCCACATCC
TCGTCCTGGGGTCTGTGGGGCGGTAAACTGAGCTCCGTGCTAACCACCGC
CACGGAGGGATTGGGCACGATAACCACCCAAGTCAACCAGGGGCTTAATC
AAATCATCGGAGTGCCCGATCCCGAGGAGCTGGCTCGCATTAATGTGGCT
GAAAAGGCGGAAAAGGCTGCTAAAGCGCCGCCAGAGGAAAATGTCGACGA
TGAAAAAGAATCTTCGGCCGCCTTTGGCTTGGACTTTGTCACCAATCTGG
GCTCCAAGGTTCTCAACACCGGACTGGATACACTCGAGGGCATTGGCAAG
AAGACCATGACCATCCTGCAAGACAACGATCCCAAGCTGATGAACAAGAG
GAAACTGCTCGGTCTGGAGGCCAACTCGCCTAATTTGAGTGCCGTGTTGC
TGGAGGCAAAGAAGGAGGCCGACCAAATGGAGCAATCCCTGCAACAGCTA
CAGCTGAAAAGACAGAAGGCGCAGCTGCGTTTCGAAATCCTTTTCGAAAA
TTACTGCGGCCTGGTGCACTTCGAGGCCCTGGAGATCCTTTCCAAGGAGT
CACGCCTCAAACTGGACACCCTACTCGATGCGGTTAGTGGCAATGCCCGT
GCAGAGTTGCAGGAAACGATAAACGAGGTGAAGGAACTGATCGAACTGGA
GGATCTGGATGTGGAGAGTGAAGGTGACTACGAGGCGGAGGAACTGAGCG
AGCGATTGGCGGCCACAATCAAGGACGCCGAGCTGGGCATTCAGTTTGAC
GACATAGCCAATCACTGGACACAGTCCCTCAGCTGGTTGACCTCAGAGGA
AGCAACTGCCGCCGATCTGGAGCAAGCCTATGCTAAGAGCATCCACGCGC
TGAGTGAAGCGTGCGCCCTCGAGATGTGTAAGCTGCACAAAATCGCCGAG
CTGTTGCTGGTGAAGCCACATCACAGCACCGCCAACGAAGTGGATGGCGT
CGTCAATCTCTGCCAGCAGTTCAATGGACACCTTCAAGGACTTAGCCACC
GCTTCGCCGCCGTTCTGAGCGGCAAGTCAGAAACGGAGGAATCAAAAGGC
CGGGTCAGCACATTCTTTTCCGAAATGCTATCTGCCGTGCAGTTCATCGA
GAAGGCCTACAAGCTATTTACACCCATTCTCCAGATGGGAGCTGTGTAAA
AGCTTTCTAGACCAT
BS23236.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:29:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9590-RA | 1383 | CG9590-PA | 1..1383 | 17..1399 | 6885 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:29:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9590-RA | 1578 | CG9590-RA | 62..1445 | 17..1400 | 6890 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:29:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15786764..15787758 | 17..1011 | 4960 | 99.9 | Plus |
3R | 32079331 | 3R | 15787818..15788206 | 1012..1400 | 1930 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:29:32 has no hits.
BS23236.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:31 Download gff for
BS23236.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9590-RA | 64..1444 | 17..1397 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:58:10 Download gff for
BS23236.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9590-RA | 62..1442 | 17..1397 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:05:35 Download gff for
BS23236.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9590-RA | 62..1442 | 17..1397 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:05:35 Download gff for
BS23236.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15786764..15787758 | 17..1011 | 99 | -> | Plus |
3R | 15787818..15788203 | 1012..1397 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:58:10 Download gff for
BS23236.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11613540..11613925 | 1012..1397 | 99 | | Plus |
arm_3R | 11612486..11613480 | 17..1011 | 99 | -> | Plus |
BS23236.pep Sequence
Translation from 16 to 1398
> BS23236.pep
MAKNPKKEEDGGNDWAQSDEDDNWDDWGDDDDKFVHVEKEQQPQEKVSSR
NDAKGTAENQEKLETPRISAPATASATSSSWGLWGGKLSSVLTTATEGLG
TITTQVNQGLNQIIGVPDPEELARINVAEKAEKAAKAPPEENVDDEKESS
AAFGLDFVTNLGSKVLNTGLDTLEGIGKKTMTILQDNDPKLMNKRKLLGL
EANSPNLSAVLLEAKKEADQMEQSLQQLQLKRQKAQLRFEILFENYCGLV
HFEALEILSKESRLKLDTLLDAVSGNARAELQETINEVKELIELEDLDVE
SEGDYEAEELSERLAATIKDAELGIQFDDIANHWTQSLSWLTSEEATAAD
LEQAYAKSIHALSEACALEMCKLHKIAELLLVKPHHSTANEVDGVVNLCQ
QFNGHLQGLSHRFAAVLSGKSETEESKGRVSTFFSEMLSAVQFIEKAYKL
FTPILQMGAV*
BS23236.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:47:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9590-PA | 460 | CG9590-PA | 1..460 | 1..460 | 2333 | 100 | Plus |