Clone BS23242 Report

Search the DGRC for BS23242

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:232
Well:42
Vector:pDNR-Dual
Associated Gene/TranscriptEap-RA
Protein status:BS23242.pep: full length peptide match
Sequenced Size:785

Clone Sequence Records

BS23242.complete Sequence

785 bp assembled on 2011-01-25

GenBank Submission: KX805557

> BS23242.complete
GAAGTTATCAGTCGACATGGCCAGTGATTCTGGCAGCGATTATGAGGTGG
AGGCTTTCTTCAATCCCAAGCGAGTTCAACGCACAGTCAACGACGACAGT
GCGGATCTATTGGGAAACTTCGATGACCAGAAGCGAAGGGAGATCTTCGA
GGGCACGTATGTGGACAAGGAGGACGGACGGAATCCCAGTGACCCGGAGG
ATAGTAAGAGCGAGGATGAGGCCAAGTCCGACGACGAGGCAGCCGCTGAG
GGCAGTGCTGCTTCCGGAGCCGAGGAAGAGGAATCTGCGGAAAATGGGCA
GATAACCAGTGACCAGCTGAGTTCACTGCTTCGAGGAGCCTCCAAAACCA
ACAGACACGTCCTGTACGTGACGAACCTGAACTTCGAAACCACAAAGGAC
GACCTGGAGCTGCACTTCTCTGCGGCAGGCACGGTCAAGTCTATCCGCAT
TCCCAAGAAGCGACGAGGGGGCTTCGCCTTTGTGGAAATGGCCGACCTAA
GCAGTTTCCAGAATGCCTTCCAGCTGCACAACACAGAGCTGCAGGGACGC
AACATCAAGGTGCAGATCTCCGAGGCGGGCAAGAAGAAGTCGGCCAACAA
GAAGAACATCATCAAACAGAAGAACCGAAAGCTGGCCGAGATGCGCAACG
AGCAGAAGACCTTCACGAAGAGCGGCAAGTTTTACGACAAGGACCTGAAA
AAGGAGAAGGCCAAGGAAATGCTGGCGCGAAAGCGGTGGCGCAAAAAGCC
CGCCCCCAGACCCACATAAAAGCTTTCTAGACCAT

BS23242.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:29:47
Subject Length Description Subject Range Query Range Score Percent Strand
Eap-RA 753 CG3594-PA 1..753 17..769 3765 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:29:48
Subject Length Description Subject Range Query Range Score Percent Strand
Eap-RA 863 CG3594-RA 42..795 17..770 3770 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:29:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24780958..24781711 17..770 3770 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:29:46 has no hits.

BS23242.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:33 Download gff for BS23242.complete
Subject Subject Range Query Range Percent Splice Strand
Eap-RA 14..764 17..767 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:58:17 Download gff for BS23242.complete
Subject Subject Range Query Range Percent Splice Strand
Eap-RA 42..792 17..767 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:05:41 Download gff for BS23242.complete
Subject Subject Range Query Range Percent Splice Strand
Eap-RA 42..792 17..767 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:05:41 Download gff for BS23242.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24780958..24781708 17..767 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:58:17 Download gff for BS23242.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20668481..20669231 17..767 100   Plus

BS23242.pep Sequence

Translation from 16 to 768

> BS23242.pep
MASDSGSDYEVEAFFNPKRVQRTVNDDSADLLGNFDDQKRREIFEGTYVD
KEDGRNPSDPEDSKSEDEAKSDDEAAAEGSAASGAEEEESAENGQITSDQ
LSSLLRGASKTNRHVLYVTNLNFETTKDDLELHFSAAGTVKSIRIPKKRR
GGFAFVEMADLSSFQNAFQLHNTELQGRNIKVQISEAGKKKSANKKNIIK
QKNRKLAEMRNEQKTFTKSGKFYDKDLKKEKAKEMLARKRWRKKPAPRPT
*

BS23242.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:48:02
Subject Length Description Subject Range Query Range Score Percent Strand
Eap-PA 250 CG3594-PA 1..250 1..250 1271 100 Plus