BS23254.complete Sequence
1238 bp assembled on 2011-01-25
GenBank Submission: KX800824
> BS23254.complete
GAAGTTATCAGTCGACATGATGATCGAGTGGTGGCTGCCATGGGTGTGCC
TCTTGCCGCTCATGCAGGCGGATCCTGTTGCTCCCCAGCTGGATCTTGGT
GTGAAGGACTTCCAGCTGGAGCTTCTGCGCGAGTTAAGCGACCTGGTGCA
ACAGCGGATTGAACCGAGTCTCAACGACTACCTGGATCGTCTAGGACGCA
TTCCTCGGAATGCCAACTACACCGAAGAGATGAGTGCAGCTCGCGCAACA
CCAAAGCTTCAATTGAAGGTGACGCTCATCAAGCAGCTGCTCGACGTGCG
TCCGCACCTGGACACGGATATGGAGTACACCATTGTGCTGCGCAACCTGG
TCTTTCTGAACCGAGTCAGATCCACGCTGAGGGCTGCCGAGGAGACTAGC
ACACAAGAGATCCGAATGATGCGCATGCACCGCCTCTGCCAGCAACTTGA
CCGACCGGCTCCTCATCGCGGCAGTCGCCTGATCAACGAACAGACAGTCG
GGGCGGCATTGGGGCAACTCAATCTGACCAAAAAGGAGGTGAACTCCACC
GGCTTGGATCTCAATGAGTTCGGGGCGCAGCTGTACGAGCGGGTCAAGTT
ATCCGGCGCCGAAATCATCGACAACTACCTGCACATACTGCGTTCCCTGC
TGCAGGACATCATCGACGGTGACCATGCTGATCTGGCCGGGAGCAGTGCC
AAGCTGGACAAGATGCAGCAGCAGCTGGACGTCATGCTTGCCACGGAGGA
CTTCTTCGAGAAACGTCAACGGGTGTATGCGTACCTGGAGCACCACTTGC
GCACCGATTACGAGGAGATGCGGGACACATCGAGCAGCGAGCACATCACC
GAACATCTTCTCGCCCAGCTGAAGACCAAGGGACTGGACCTGTTCGTCAT
CTTTCTTTTTAGCAATTTTGAATTCCTAGACCTGGTGCACGAGCACTGGG
AGCAGCTGTTGCCACAGTCACCCAGTTTGCTATACGACGAGACCGCACGC
CAATTGTACGATCTGCAGCAGCTGTATCAGGTCTTCAAGCTGGACACGGA
GTGCGAGGCCAAGTACACGGCCTACTCGGACGCACTGCGTCGCTTGCACG
AGCGGACCGTGGAGCAGGGTCAGCGCAACCGGCACATCTTTGAGCTGCTC
CACAACGCGGCACAAAGCGTCGGCACGGTTACCTTCAACATGATCCGGGC
CAAGTGCAATGAGCTAAGATGAAAGCTTTCTAGACCAT
BS23254.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:30:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42369-RA | 1206 | CG42369-PA | 1..1206 | 17..1222 | 6030 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:30:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42369-RA | 1397 | CG42369-RA | 157..1362 | 17..1222 | 6030 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:30:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6395888..6397093 | 1222..17 | 6030 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:30:01 has no hits.
BS23254.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:35 Download gff for
BS23254.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42369-RA | 157..1361 | 17..1221 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:58:22 Download gff for
BS23254.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42369-RA | 157..1361 | 17..1221 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:05:45 Download gff for
BS23254.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42369-RA | 157..1361 | 17..1221 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:05:45 Download gff for
BS23254.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6395889..6397093 | 17..1221 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:58:22 Download gff for
BS23254.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6395889..6397093 | 17..1221 | 100 | | Minus |
BS23254.pep Sequence
Translation from 16 to 1221
> BS23254.pep
MMIEWWLPWVCLLPLMQADPVAPQLDLGVKDFQLELLRELSDLVQQRIEP
SLNDYLDRLGRIPRNANYTEEMSAARATPKLQLKVTLIKQLLDVRPHLDT
DMEYTIVLRNLVFLNRVRSTLRAAEETSTQEIRMMRMHRLCQQLDRPAPH
RGSRLINEQTVGAALGQLNLTKKEVNSTGLDLNEFGAQLYERVKLSGAEI
IDNYLHILRSLLQDIIDGDHADLAGSSAKLDKMQQQLDVMLATEDFFEKR
QRVYAYLEHHLRTDYEEMRDTSSSEHITEHLLAQLKTKGLDLFVIFLFSN
FEFLDLVHEHWEQLLPQSPSLLYDETARQLYDLQQLYQVFKLDTECEAKY
TAYSDALRRLHERTVEQGQRNRHIFELLHNAAQSVGTVTFNMIRAKCNEL
R*
BS23254.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:48:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42369-PA | 401 | CG9511-PA | 1..401 | 1..401 | 2059 | 100 | Plus |
