BS23269.complete Sequence
977 bp assembled on 2011-01-25
GenBank Submission: KX804565
> BS23269.complete
GAAGTTATCAGTCGACATGATCACCTGTTTGAGAAACTGGCCGCTCCTGC
TGAAACGCTTCTCGGTCCACCAGATCCACCAGTTCACCCAACTGTCCGGC
CGCTTCGAGCGTCCGCCTCAATCCGGTAAATCCTCGCGGGATCCCTATCT
CGTCACGGTGGTGCAGGGAAGATCGAAGAAGCCGCGATTTCCGGGAGAGC
GGTCCAATCAGCGTTTCGGCGAGGATAGCTGGTTCGTCAGCTCCACGCCG
CTGGCCGAGGTGATGGGCGTGGCCGACGGCGTGGGCGGTTGGCGTGACTT
GGGCGTGGATGCGGGTCGTTTCGCCAAGGAGCTGATGAGCTGCTGTTCCG
GGCAGACGCAGCTATCGGATTTCGATGGACGCAGTCCCCGGAACATGCTC
ATCGCCGGCTTCCAGGAGTTGTCCCACCGGGAGCATCCTGTTGTGGGTAG
CAGCACTGCCTGCCTGGCGACGATGCATCGGAAGGACTGCACCCTGTACA
CCGCCAATTTGGGGGACAGCGGCTTCTTGGTGGTGCGAAATGGACGGGTG
CTGCACCGCTCAGTGGAGCAAACCCACGACTTCAACACGCCCTATCAGCT
GACAGTGCCGCCGGAGGATCGGAAGGAGAGCTACTACTGCGACAAGCCGG
AAATGGCCGTGTCCACGAGGCACTCCCTACTACCCGGTGACCTGGTGCTC
CTGGCCACCGATGGCTTGTTCGATAACATGCCCGAGAGCATGTTGCTCAG
TATATTGAATGGCCTAAAGGAGCGTGGAGAGCACGATCTACTTGTGGGCG
CCAGCCGGGTGGTGGAGAAGGCCAGGGAACTGTCCATGAATGCCAGTTTC
CAATCACCATTCGCCATCAAGGCCAGGCAACACAATGTTTCATACTCCGG
CGGCGGGAAACCCGATGACATCACCCTAATCCTGTCCAGCGTCGAGGTGC
CAAATGCCTAGAAGCTTTCTAGACCAT
BS23269.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:30:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fig-RA | 945 | CG7615-PA | 1..945 | 17..961 | 4710 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:30:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fig-RA | 1180 | CG7615-RA | 97..1041 | 17..961 | 4710 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:30:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29779412..29780356 | 961..17 | 4710 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:30:10 has no hits.
BS23269.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:36 Download gff for
BS23269.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fig-RA | 376..1320 | 17..961 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:58:27 Download gff for
BS23269.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fig-RA | 97..1041 | 17..961 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:05:50 Download gff for
BS23269.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fig-RA | 97..1041 | 17..961 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:05:50 Download gff for
BS23269.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29779412..29780356 | 17..961 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:58:27 Download gff for
BS23269.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25605134..25606078 | 17..961 | 99 | | Minus |
BS23269.pep Sequence
Translation from 16 to 960
> BS23269.pep
MITCLRNWPLLLKRFSVHQIHQFTQLSGRFERPPQSGKSSRDPYLVTVVQ
GRSKKPRFPGERSNQRFGEDSWFVSSTPLAEVMGVADGVGGWRDLGVDAG
RFAKELMSCCSGQTQLSDFDGRSPRNMLIAGFQELSHREHPVVGSSTACL
ATMHRKDCTLYTANLGDSGFLVVRNGRVLHRSVEQTHDFNTPYQLTVPPE
DRKESYYCDKPEMAVSTRHSLLPGDLVLLATDGLFDNMPESMLLSILNGL
KERGEHDLLVGASRVVEKARELSMNASFQSPFAIKARQHNVSYSGGGKPD
DITLILSSVEVPNA*
BS23269.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:48:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fig-PA | 314 | CG7615-PA | 1..314 | 1..314 | 1647 | 100 | Plus |
| CG12091-PB | 321 | CG12091-PB | 54..319 | 43..309 | 607 | 45.5 | Plus |
| CG12091-PA | 321 | CG12091-PA | 54..319 | 43..309 | 607 | 45.5 | Plus |
| CG15035-PA | 374 | CG15035-PA | 107..373 | 43..309 | 583 | 46.5 | Plus |
