BS23281.complete Sequence
1412 bp assembled on 2011-01-25
GenBank Submission: KX801837
> BS23281.complete
GAAGTTATCAGTCGACATGGCTGAGGAAGGACCACCGGAGCCGAGCATTG
ATTTTGTCCCAGCTCTTTGCTTTGTACCACGCGGCGTGGCTAAGGATCGT
CCCGACAAGATCGTGCTGACGCAGGCGGAGCTGGCCAGGATTATCGGTGA
TACGCAACAGGAATTGGACGAGGAGAGCGACGACGATGCAGAGGAGGGCG
AAAATGCCGAGGAAGACCAAAACGACATGGATGTGGACGACCACGCGGAT
GCCAATAGTGAGAACCGCGATCCGCAGGACGAGTTCCAATTCCAGGAGTA
TGACAACGAGGCGAATGCTAATGTCACCAGTCTGGCCAACATCGTGGACG
CTGGCGAGCAAATCCCCGATGAGGACGAAGACTCCGAGGCCGAGGACGAG
GTGATCAAGCCCAGCGACAACCTCATTCTAGTGGGTCACGTTCAAGACGA
CGCCGCCTCCATGGAGGTGTGGGTTTTCAACCAGGAGGAGGAGGCTCTCT
ACACCCACCACGACTTTCTGCTGCCAAGCTTTCCTCTGTGCATCGAGTGG
ATGAATCACGACGCGGGCAGCGAAAAGGCGGGCAACATGTGCGCCATCGG
CTGCATGGATCCGATAATCACAGTCTGGGATCTAGACATACAGGACGCTA
TCGAGCCCACATTTAAGCTGGGTTCCAAAGGCAGCCGGAAGCAGAACAAA
GAGCAGTATGGACACAAGGACGCCGTGCTGGATCTCTCTTGGAACACCAA
CTTTGAGCACATTCTGGCCAGCGGGTCCGTGGACCAAACTGTGATTCTGT
GGGACATGGACGAGGGCCAGCCTCATACAACCATTACCGCTTTTGGCAAA
CAGATTCAGTCGCTGGAATTCCATCCGCAAGAGGCTCAAAGCATTCTTAC
CGGCTGTGCCGATGGATACGTGCGACTCTTCGATTGCCGCGACGCTGAGG
GCGTCAACTCGTCCAGCATTGAGTGGAAAGTTGACGGTGAAGTGGAGAAG
GTCCTGTGGCATCCCACACAGACCGACTACTTCATCGTGGGCACCAACGA
TGGCACCTTGCATTACGCCGACAAACGTTCTCCTGGACAACTGCTGTGGT
CCGTAAAGGCCCACAACGAGGAAATCTCCGGTGTGTGCTTCAACAACCAG
AAGCCTAATCTGCTGACCTCCACCTCCACGGAGGGCACCCTAAAGGTGTG
GAACTTTGATGGCACAGAGGCAAAGCACGTCTACGAGCACGAGTTCAACA
TGGGTCGCTTGCAGTGCATGCGCCAGTGCCCCGAGGATCCCTACACCCTG
GCCTTCGGCGGAGAGAAGCCTCCGCGCTGTGCGATCTTTAACATCAAGAA
CTCGATAGCCGTGCGCCGAACGTTTGGAATCCCTGATGCAGAGTAGAAGC
TTTCTAGACCAT
BS23281.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:30:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
nclb-RA | 1380 | CG6751-PA | 1..1380 | 17..1396 | 6900 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:30:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
nclb-RA | 1549 | CG6751-RA | 90..1469 | 17..1396 | 6900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:30:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10875837..10877216 | 17..1396 | 6900 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:30:19 has no hits.
BS23281.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:38 Download gff for
BS23281.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6751-RA | 84..1463 | 17..1396 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:58:30 Download gff for
BS23281.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
nclb-RA | 90..1469 | 17..1396 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:05:53 Download gff for
BS23281.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
nclb-RA | 90..1469 | 17..1396 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:05:53 Download gff for
BS23281.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10875837..10877216 | 17..1396 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:58:30 Download gff for
BS23281.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6763342..6764721 | 17..1396 | 100 | | Plus |
BS23281.pep Sequence
Translation from 16 to 1395
> BS23281.pep
MAEEGPPEPSIDFVPALCFVPRGVAKDRPDKIVLTQAELARIIGDTQQEL
DEESDDDAEEGENAEEDQNDMDVDDHADANSENRDPQDEFQFQEYDNEAN
ANVTSLANIVDAGEQIPDEDEDSEAEDEVIKPSDNLILVGHVQDDAASME
VWVFNQEEEALYTHHDFLLPSFPLCIEWMNHDAGSEKAGNMCAIGCMDPI
ITVWDLDIQDAIEPTFKLGSKGSRKQNKEQYGHKDAVLDLSWNTNFEHIL
ASGSVDQTVILWDMDEGQPHTTITAFGKQIQSLEFHPQEAQSILTGCADG
YVRLFDCRDAEGVNSSSIEWKVDGEVEKVLWHPTQTDYFIVGTNDGTLHY
ADKRSPGQLLWSVKAHNEEISGVCFNNQKPNLLTSTSTEGTLKVWNFDGT
EAKHVYEHEFNMGRLQCMRQCPEDPYTLAFGGEKPPRCAIFNIKNSIAVR
RTFGIPDAE*
BS23281.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:48:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
nclb-PA | 459 | CG6751-PA | 1..459 | 1..459 | 2471 | 100 | Plus |
Caf1-PB | 429 | CG4236-PB | 228..415 | 232..409 | 167 | 26.8 | Plus |
Caf1-PA | 430 | CG4236-PA | 229..416 | 232..409 | 167 | 26.8 | Plus |