BS23284.complete Sequence
1148 bp assembled on 2011-01-25
GenBank Submission: KX805627
> BS23284.complete
GAAGTTATCAGTCGACATGGCGAATCTCAGTCCGTTTGTCTACTGGTCGC
AGACCAAGCAAACTCTATTACTGAAAGTGGATCTTAAAGATGCCAAGGGC
GCCATTGCGGACTTTTCGCCGGTTTCGGTGAATTTCAGTGCCAACGGCCA
CGGAGCTCGTGGAGTGAATGCCTACAAGTTCGAGCTGCACTTCTACGCCC
TGATCGACGATGAGAATGCCACCTTCGTGGTCAGCGACAACAAGATTGAA
CTTCAGATACGCAAACTGGAGCCGGAATGGTGGCCCCGCCTGGTGGCCAC
ACCCCAGAAGCCCCACTGGCTCAAGATCGACTTCGATCGCTGGCGCACCG
AGGACGACGTCGAGGTGGAGGAGAAGCCGCGCGATGTGCGCCAGGACTAC
GAGAAGGAGTACGCCGATCTCCAGAAGCGCGAGCTGGGCTACATTAAGGA
GAAAACCAAGAAGGTGTACATGATCTTTTACAACCTGGCCATGTTCGTGG
GCTATCTGTATATTATGGTTGTAATGGGAGTACTTTACTATCGCGATGGC
GTCGATAGCATAGGAAAAACCTACGCCAATGTGGGCAACGCCTTCAAGTT
TATCCAGCTCCTGCAGTATCTGGAGGTGATGCACCCCATGTTCGGTTACA
CCAAGGGCAGTCCTGTGGTGCCCTTCTTCCAGGTGTCCGGACGAAACTTT
ATCCTTTTTCTCATGATCGACATGGAACCGCGCATGTATGCCAAACCCGT
CGTTTTCTACGTTTTTATAATATGGTCTCTGGTCGAATTGGTGCGATATC
CATACTACTTGGCTCAATTGCTGGGCCGCGAAGTGGGTCTGCTCACCTGG
CTGAGATACACCATCTGGATACCGCTCTATCCTATGGGCATCCTTTGCGA
GGGCATTATCGTATTGCGCAATATTCCCTACATCGAAGAGACGAAACGGT
TTACCGTGGAAATGCCTAATCCCTGGAACATCACCTTTGACATGGTTCTC
TTCCTAAAAATATACCTAATGCTGCTGATCATACCGGGCAGCTACCTAGT
TATGTCGCACATGGCCAAGCTTAGGTCCAAAAAGCTGGGAAAGGGGCGCG
CCAAGCGCCAACAACACCTTCACGCCGACTAGAAGCTTTCTAGACCAT
BS23284.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:30:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9267-RA | 1116 | CG9267-PA | 1..1116 | 17..1132 | 5580 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:30:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9267-RA | 1335 | CG9267-RA | 92..1207 | 17..1132 | 5580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:30:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13445046..13445399 | 449..96 | 1770 | 100 | Minus |
| 2L | 23513712 | 2L | 13444634..13444980 | 795..449 | 1735 | 100 | Minus |
| 2L | 23513712 | 2L | 13444231..13444568 | 1132..795 | 1690 | 100 | Minus |
| 2L | 23513712 | 2L | 13445479..13445560 | 98..17 | 410 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:30:14 has no hits.
BS23284.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:37 Download gff for
BS23284.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9267-RA | 90..1205 | 17..1132 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:58:29 Download gff for
BS23284.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9267-RA | 92..1207 | 17..1132 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:05:52 Download gff for
BS23284.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9267-RA | 92..1207 | 17..1132 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:05:52 Download gff for
BS23284.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13445046..13445397 | 98..449 | 100 | <- | Minus |
| 2L | 13445480..13445560 | 17..97 | 100 | | Minus |
| 2L | 13444231..13444567 | 796..1132 | 100 | <- | Minus |
| 2L | 13444634..13444979 | 450..795 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:58:29 Download gff for
BS23284.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13444231..13444567 | 796..1132 | 100 | <- | Minus |
| arm_2L | 13444634..13444979 | 450..795 | 100 | <- | Minus |
| arm_2L | 13445046..13445397 | 98..449 | 100 | <- | Minus |
| arm_2L | 13445480..13445560 | 17..97 | 100 | | Minus |
BS23284.pep Sequence
Translation from 16 to 1131
> BS23284.pep
MANLSPFVYWSQTKQTLLLKVDLKDAKGAIADFSPVSVNFSANGHGARGV
NAYKFELHFYALIDDENATFVVSDNKIELQIRKLEPEWWPRLVATPQKPH
WLKIDFDRWRTEDDVEVEEKPRDVRQDYEKEYADLQKRELGYIKEKTKKV
YMIFYNLAMFVGYLYIMVVMGVLYYRDGVDSIGKTYANVGNAFKFIQLLQ
YLEVMHPMFGYTKGSPVVPFFQVSGRNFILFLMIDMEPRMYAKPVVFYVF
IIWSLVELVRYPYYLAQLLGREVGLLTWLRYTIWIPLYPMGILCEGIIVL
RNIPYIEETKRFTVEMPNPWNITFDMVLFLKIYLMLLIIPGSYLVMSHMA
KLRSKKLGKGRAKRQQHLHAD*
BS23284.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:48:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9267-PA | 371 | CG9267-PA | 1..371 | 1..371 | 1964 | 100 | Plus |
| CG6746-PA | 245 | CG6746-PA | 23..241 | 149..366 | 241 | 29.7 | Plus |
