Clone BS23307 Report

Search the DGRC for BS23307

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:233
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG32163-RA
Protein status:BS23307.pep: full length peptide match
Sequenced Size:464

Clone Sequence Records

BS23307.complete Sequence

464 bp assembled on 2011-01-25

GenBank Submission: KX802765

> BS23307.complete
GAAGTTATCAGTCGACATGCTTTCCAAATTGCTTCCAATTCTGATTCTGC
AAGGTGGCCGAAGAACGTATTCCTTGTGCTCGAGAGATTACACCATCCCC
ACAAGTAACCACACCCTAACTGGTCAAATTTTAAAGGTTCCAAACCTAAA
TTCGCAGGAAAGATGTTTTGGTACGCACATTGTTGTCCGGCATAAGAGAG
GTCGGTTCTACACCGACATTGGCGAGCTCCGGGCTGTATTGGTATACTCC
ATCAGGGACGGTGTGATGACCATCAACAGCACCAACGTCCCGGAGGAACT
GGGCGGACATGGCATTGGGAAGCTACTGGCCAAGTCGGCACTGGACTACG
CACTGTTGAATGGGCACTTCATTATTATAAGGTGTCGGTTTGTCCAGCAC
TACATCGACAAGTATGAGCCGCAATACGCCAAGTACATATTAAATTAGAA
GCTTTCTAGACCAT

BS23307.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:30:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG32163-RA 432 CG32163-PA 1..432 17..448 2160 100 Plus
CG32163-RB 183 CG32163-PB 1..183 266..448 915 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:30:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG32163-RA 810 CG32163-RA 36..467 17..448 2160 100 Plus
CG32163-RB 725 CG32163-RB 86..382 152..448 1485 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:30:38
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16587369..16587800 17..448 2160 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:30:39 has no hits.

BS23307.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:40 Download gff for BS23307.complete
Subject Subject Range Query Range Percent Splice Strand
CG32163-RA 37..468 17..448 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:58:39 Download gff for BS23307.complete
Subject Subject Range Query Range Percent Splice Strand
CG32163-RA 213..644 17..448 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:01 Download gff for BS23307.complete
Subject Subject Range Query Range Percent Splice Strand
CG32163-RA 36..467 17..448 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:01 Download gff for BS23307.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16587369..16587800 17..448 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:58:39 Download gff for BS23307.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16580469..16580900 17..448 100   Plus

BS23307.pep Sequence

Translation from 16 to 447

> BS23307.pep
MLSKLLPILILQGGRRTYSLCSRDYTIPTSNHTLTGQILKVPNLNSQERC
FGTHIVVRHKRGRFYTDIGELRAVLVYSIRDGVMTINSTNVPEELGGHGI
GKLLAKSALDYALLNGHFIIIRCRFVQHYIDKYEPQYAKYILN*

BS23307.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:48:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG32163-PA 143 CG32163-PA 1..143 1..143 748 100 Plus
CG32163-PB 60 CG32163-PB 1..60 84..143 318 100 Plus