BS23309.complete Sequence
647 bp assembled on 2011-01-25
GenBank Submission: KX802085
> BS23309.complete
GAAGTTATCAGTCGACATGAATAATATTGAAGAGGACACCGAAGCAGCCT
TCAAACGGCTCCAGGCTGTCATTCCACAGGTGAAGCAGGCCTACGAGGAA
GCCATTGGACAGATCTTCTCGGATTTAAACTCCTCAGATCTTGAGTCGTG
TGCCTCCATCCTCGAGGAGCACGAATCCACGAGCCTGGACACCGAGCAAA
TAATCCACAGCACCCGTCGGCTTATGACCAAGATCGTCCTGGATGTGAAC
CAGTGCTTCTTCTCCGGCAACGACGTGGAGACCAAGCTGACCACGCTGGA
AATGCTTAAGGAGCAGTTTGCCGCCCACGAGGGCAAGAACTGGAACTTCA
ACTGTCTGTCCCCTGAGGAACTTACTCGCCCTCTGCGCATGCACAACTTG
AATCTAAGCATCACATTCATGGAGCAACAGCTTAAGAAACAGGAAAAGGA
ACTCGAGATTGCTATGGCCAAAAGCATTAAAAATCGACAGCTTATACATG
ATGTCCACGCTGAACGGGTGAAAGTGGGATGTATGATGAAGCAGCAGTTG
GCCGAGTACCAGGCCATTAAGCCACAGTTAATGGAAATGGAACGGCTAAT
AAATGATTCGTATGTGCAGGAAGAAATGTAAAAGCTTTCTAGACCAT
BS23309.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:30:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Nnf1b-RA | 615 | CG31658-PA | 1..615 | 17..631 | 3075 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:30:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Nnf1b-RA | 783 | CG31658-RA | 70..684 | 17..631 | 3075 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:30:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 810809..811022 | 130..343 | 1070 | 100 | Plus |
2L | 23513712 | 2L | 811257..811432 | 456..631 | 880 | 100 | Plus |
2L | 23513712 | 2L | 811088..811203 | 342..457 | 580 | 100 | Plus |
2L | 23513712 | 2L | 810646..810758 | 17..129 | 565 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 16:30:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
G-element | 4346 | G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). | 3235..3311 | 24..103 | 113 | 65.4 | Plus |
BS23309.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:41 Download gff for
BS23309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Nnf1b-RA | 61..673 | 17..629 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:58:44 Download gff for
BS23309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Nnf1b-RA | 70..682 | 17..629 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:04 Download gff for
BS23309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Nnf1b-RA | 70..682 | 17..629 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:04 Download gff for
BS23309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 810646..810758 | 17..129 | 100 | -> | Plus |
2L | 810809..811021 | 130..342 | 100 | -> | Plus |
2L | 811089..811203 | 343..457 | 100 | -> | Plus |
2L | 811259..811430 | 458..629 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:58:44 Download gff for
BS23309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 810646..810758 | 17..129 | 100 | -> | Plus |
arm_2L | 810809..811021 | 130..342 | 100 | -> | Plus |
arm_2L | 811089..811203 | 343..457 | 100 | -> | Plus |
arm_2L | 811259..811430 | 458..629 | 100 | | Plus |
BS23309.pep Sequence
Translation from 16 to 630
> BS23309.pep
MNNIEEDTEAAFKRLQAVIPQVKQAYEEAIGQIFSDLNSSDLESCASILE
EHESTSLDTEQIIHSTRRLMTKIVLDVNQCFFSGNDVETKLTTLEMLKEQ
FAAHEGKNWNFNCLSPEELTRPLRMHNLNLSITFMEQQLKKQEKELEIAM
AKSIKNRQLIHDVHAERVKVGCMMKQQLAEYQAIKPQLMEMERLINDSYV
QEEM*
BS23309.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:48:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Nnf1b-PA | 204 | CG31658-PA | 1..204 | 1..204 | 1035 | 100 | Plus |
Nnf1a-PA | 194 | CG13434-PA | 2..193 | 6..197 | 574 | 57.3 | Plus |