BS23315.complete Sequence
1475 bp assembled on 2011-01-25
GenBank Submission: KX806006
> BS23315.complete
GAAGTTATCAGTCGACATGTCGCGCCAATTGAGTTTCAATCCGCAGAAAG
AATATGAGTTGATCGAGTACCCCGGCCGAGTGGTAAATCCCGATCGGATG
ATAGCCACTCTGGGCGGCATCATCAATGTGTCTAAGGTTTTGGGCGACGA
AGTGAAACGATTGGCGTTGCACTTCCATCCGGAGAATCCCTACAACAAAC
CCACTTTTGGGGACTGCACGGATAAGACTGGTGTCCTGCTATCCATAACC
GTGAGGCGCCACAAAAAGGACAAGCAACGGCCTCCGGAATATTTTGTGCG
GGTGTTGGGCCACTGCAGCAGGAGCTTCACCTTTGAAACGCTTTGTGATT
TCCAATACCTACCCCTCTGGTCAACTCCCAAAAGTGACAACGCAAATGCT
GCCCAGGAGCTCACGTACGCTTTGGACCAGTTGAAACCCAAAAACACCAC
CGACTTGGACTACTTTAAACGTCGCCACAGCCAGTTGCTGGCGCTGCCCG
AATTGTTCACCCACGTGGACACTGTCTATGCGGGCACGTATCGCATCGAT
CCCTCAGAAGACGGCCAACATGAGGTGCTGGGCGTGCAGTCCAAGTCCTC
CTACGACAACCAGGGCGTGGTCTCGTTCAACATGGTGGACAGCTTTCCCA
CCCAGGCAGACTCCCAAAACCTTAAACGACTCAAGGTCAAGTACGTTTCG
GATGAGCAGCTGGCATTGGTCAAAAAACTTTTCGATGACTGCCCAATTTG
GACCCGAATCGCGCTGCAATATGAATCGGGTTTGACCAACGACAAACTCA
AGTGCATCACTCCATCGCTGGCATTTTACTTTAGCAACGGCCCGTGGCGC
ACTTTGTATGTTCGCTTCGGCTACGATCCCCGCAAGGACTTCAATAGTCG
CTACTATCAGACTTTCGACTTCCGACTCCGATTCAGCACTGGTCTCTCCG
AATTCGTGTATGCTAAGAAGTTCGTAAAGCAACGGAGGGCGGCGAACGCT
CCATTCGCGCCCATCGAGGATCGAGTCTCTGATTTGGTTCAGGACATTGA
CTATCCCTACTTCGATGAGCACAAGCTGCCGCGCTCCAGGCAATGCATGC
TGCGCTACTGCGACGTCCGTATGACGAGGATCCAGGAAATGTTGGAGAAG
ATCCCCACTCCACTTACCGGAGCTGTGTGCAATGAACGCACGGGCTGGCT
GCCGCCGGGATTCGATGCTCAAGTGCGTCAGATTGTCTGCGCCTCGATCA
GCGAACTTTTGCGCAACCATTACCGCAAGGAGAATCTTACAGCCGAAGTG
GAGGCAGTTACCCAGGCCGACGAAGAGGATGAAGACGAGGCCGAGGACGA
GGAGACGCAAGAAGAGGACATGGAGCTGGATGAGACGCAAGCTATGGGCA
ATTCGGAGCAATTCGTAGACAACGACATCGAGCAACTTTTCGACAATATC
ACAAGCTGAAAGCTTTCTAGACCAT
BS23315.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:30:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)37Cd-RA | 1443 | CG10563-PA | 1..1443 | 17..1459 | 7215 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:31:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)37Cd-RA | 1821 | CG10563-RA | 13..1457 | 16..1460 | 7225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:30:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19127971..19128962 | 469..1460 | 4960 | 100 | Plus |
| 2L | 23513712 | 2L | 19127453..19127656 | 135..338 | 1020 | 100 | Plus |
| 2L | 23513712 | 2L | 19127714..19127843 | 339..468 | 650 | 100 | Plus |
| 2L | 23513712 | 2L | 19127272..19127394 | 16..138 | 615 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:30:58 has no hits.
BS23315.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:43 Download gff for
BS23315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Cd-RA | 12..1453 | 17..1458 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:58:48 Download gff for
BS23315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Cd-RA | 14..1455 | 17..1458 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:08 Download gff for
BS23315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Cd-RA | 14..1455 | 17..1458 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:08 Download gff for
BS23315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19127273..19127392 | 17..136 | 100 | -> | Plus |
| 2L | 19127455..19127656 | 137..338 | 100 | -> | Plus |
| 2L | 19127714..19127843 | 339..468 | 100 | -> | Plus |
| 2L | 19127971..19128960 | 469..1458 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:58:48 Download gff for
BS23315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19127455..19127656 | 137..338 | 100 | -> | Plus |
| arm_2L | 19127714..19127843 | 339..468 | 100 | -> | Plus |
| arm_2L | 19127273..19127392 | 17..136 | 100 | -> | Plus |
| arm_2L | 19127971..19128960 | 469..1458 | 100 | | Plus |
BS23315.pep Sequence
Translation from 16 to 1458
> BS23315.pep
MSRQLSFNPQKEYELIEYPGRVVNPDRMIATLGGIINVSKVLGDEVKRLA
LHFHPENPYNKPTFGDCTDKTGVLLSITVRRHKKDKQRPPEYFVRVLGHC
SRSFTFETLCDFQYLPLWSTPKSDNANAAQELTYALDQLKPKNTTDLDYF
KRRHSQLLALPELFTHVDTVYAGTYRIDPSEDGQHEVLGVQSKSSYDNQG
VVSFNMVDSFPTQADSQNLKRLKVKYVSDEQLALVKKLFDDCPIWTRIAL
QYESGLTNDKLKCITPSLAFYFSNGPWRTLYVRFGYDPRKDFNSRYYQTF
DFRLRFSTGLSEFVYAKKFVKQRRAANAPFAPIEDRVSDLVQDIDYPYFD
EHKLPRSRQCMLRYCDVRMTRIQEMLEKIPTPLTGAVCNERTGWLPPGFD
AQVRQIVCASISELLRNHYRKENLTAEVEAVTQADEEDEDEAEDEETQEE
DMELDETQAMGNSEQFVDNDIEQLFDNITS*
BS23315.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:48:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)37Cd-PA | 480 | CG10563-PA | 1..480 | 1..480 | 2542 | 100 | Plus |
