BS23325.complete Sequence
2126 bp assembled on 2011-02-18
GenBank Submission: KX800872
> BS23325.complete
GAAGTTATCAGTCGACATGGCCCAGTTTGTGACCCACATCCAGCCAACGC
TGATGGAGGCGTCCCAAGGTCATGTTCCTCACCACCACGGACATCAGGTG
GGTGTGCAGCACTCGTCGCATCTGCCCCACAGCGGCCACAACATGCCCTC
GCCGCCAACCCACAATCACCATCATGCCCACGGACATGGTCATCATACCA
GCAGCGGTGGTCATCATGGAGGAGCAGGTGGCCATTCACAGAAGCAGGCA
GCGCATCATAGCACCACCTCCGGCCACGCCGCCAAGGGACAGCACCACAG
CCCACCGTCGAGGATCCATTCACCGCCAACGGAACACCATCCGGATCATG
TCGGTCACTACGAGTACTTCCAGCATCAGCACGAGCAGATCTTCCACCAT
GAAGGAGCAAACGGTGGTGCCAGCCACAAGCAACAGACCCACCACCATCC
CAACAAGCACGAGCACTGCCCCACAGGACACCAGAGTGCGGGCGATGGAA
ACACTTCCTTCCTGCGTGCCGCTCGCGCCGGAAATCTGGAGCGAGTGCTC
GAGCATTTGAAGAACAACATTGACATTAACACCAGCAATGCGAATGGCTT
GAATGCCCTGCACCTGGCCTCCAAGGATGGCCACATCCACGTCGTCTCGG
AACTCCTTCGTAGGGGCGCGATTGTGGATAGTGCCACCAAAAAGGGAAAC
ACTGCCCTCCACATCGCCTCATTGGCTGGACAGGAGGAGGTGGTGAAGCT
ACTGCTGGAGCACAATGCCTCCGTAAATGTGCAATCCCAGAATGGATTCA
CTCCACTCTACATGGCTGCCCAGGAGAACCACGATGCTGTGGTGCGTCTC
CTTTTGTCCAACGGAGCCAACCAGAGTCTGGCCACCGAGGATGGCTTCAC
CCCACTGGCGGTGGCCATGCAGCAGGGTCATGACAAAGTCGTTGCTGTCC
TCCTCGAGAGTGATACTCGTGGAAAGGTCAGGCTTCCTGCGCTGCACATT
GCCGCCAAAAAGGACGACGTCAAGGCAGCGACTCTGCTTCTCGATAATGA
CCATAATCCGGACGTGACTTCCAAGTCGGGCTTCACCCCGCTGCACATTG
CTTCCCATTATGGTAACCAAAACATCGCCAACCTACTCATCCAGAAGGGC
GCCGATGTCAACTACTCGGCCAAGCACAACATCAGTCCGCTGCATGTGGC
TGCTAAGTGGGGTAAGACCAACATGGTTTCCCTGCTTTTGGAAAAAGGTG
GTAACATCGAGGCAAAGACCCGGGACGGACTTACTCCGCTCCATTGCGCC
GCTCGCTCGGGTCATGAGCAAGTTGTTGACATGCTACTCGAACGAGGAGC
TCCCATCTCTGCCAAGACCAAAAATGGTTTGGCACCCCTCCATATGGCCG
CCCAGGGTGAGCATGTTGATGCCGCCCGCATCCTCTTGTACCATCGTGCT
CCCGTCGACGAGGTGACAGTGGATTATCTCACTGCTCTTCATGTGGCTGC
TCACTGTGGTCATGTTAGGGTGGCTAAGCTTTTACTAGATCGGAATGCTG
ATGCCAATGCAAGGGCTTTGAATGGATTCACTCCACTGCACATTGCCTGC
AAGAAGAACCGCTTGAAGGTGGTAGAGTTGCTCTTGCGACATGGTGCCAG
CATTAGTGCCACGACAGAGAGTGGACTTACTCCGCTCCATGTGGCCGCCT
TTATGGGTTGCATGAACATTGTCATCTATCTGCTGCAGCACGATGCCAGT
CCCGATGTGCCCACTGTGCGCGGAGAAACGCCACTCCATTTGGCCGCCAG
AGCCAACCAGACCGACATCATTCGAATCCTGCTGCGCAATGGCGCCCAGG
TGGACGCTCGTGCCCGAGAGCAACAGACACCGCTGCACATCGCTTCGCGA
CTGGGTAATGTAGACATCGTGATGCTTCTGCTGCAACATGGCGCCCAAGT
GGACGCAACCACCAAGGACATGTACACGGCACTTCACATCGCTGCCAAGG
AGGGCCAGGATGAGGTAAAAGATCTGATTGCGAAAAAGATCACCGACCAC
ATCGACACCGTTTATCTGATGCAACTGTTTTGGATACGCCATCAGGAGTT
TTTCATTTGAAAGCTTTCTAGACCAT
BS23325.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:25:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ank2-RE | 2094 | CG42734-PE | 1..2094 | 17..2110 | 10470 | 100 | Plus |
| Ank2-RK | 12795 | CG42734-PK | 1..2000 | 17..2016 | 10000 | 100 | Plus |
| Ank2-RR | 13491 | CG42734-PR | 1..2000 | 17..2016 | 10000 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:25:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ank2-RE | 2780 | CG42734-RE | 556..2649 | 17..2110 | 10470 | 100 | Plus |
| Ank2-RK | 14309 | CG42734-RK | 556..2555 | 17..2016 | 10000 | 100 | Plus |
| Ank2-RR | 15005 | CG42734-RR | 556..2555 | 17..2016 | 10000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:25:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7709519..7710283 | 1810..1046 | 3825 | 100 | Minus |
| 3L | 28110227 | 3L | 7717366..7717840 | 491..17 | 2375 | 100 | Minus |
| 3L | 28110227 | 3L | 7710349..7710802 | 1045..592 | 2270 | 100 | Minus |
| 3L | 28110227 | 3L | 7709051..7709354 | 2110..1807 | 1520 | 100 | Minus |
| 3L | 28110227 | 3L | 7710868..7710970 | 592..490 | 515 | 100 | Minus |
| 4 | 1348131 | 4 | 122410..122567 | 1605..1448 | 250 | 77.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:25:20 has no hits.
BS23325.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-18 10:40:06 Download gff for
BS23325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ank2-RE | 500..2592 | 17..2109 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:18:20 Download gff for
BS23325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ank2-RE | 556..2648 | 17..2109 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:21:23 Download gff for
BS23325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ank2-RE | 556..2648 | 17..2109 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:21:23 Download gff for
BS23325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7709052..7709350 | 1811..2109 | 100 | <- | Minus |
| 3L | 7709519..7710283 | 1046..1810 | 100 | <- | Minus |
| 3L | 7710349..7710801 | 593..1045 | 100 | <- | Minus |
| 3L | 7710868..7710969 | 491..592 | 100 | <- | Minus |
| 3L | 7717367..7717840 | 17..490 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:18:20 Download gff for
BS23325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7702152..7702450 | 1811..2109 | 100 | <- | Minus |
| arm_3L | 7702619..7703383 | 1046..1810 | 100 | <- | Minus |
| arm_3L | 7703449..7703901 | 593..1045 | 100 | <- | Minus |
| arm_3L | 7703968..7704069 | 491..592 | 100 | <- | Minus |
| arm_3L | 7710467..7710940 | 17..490 | 100 | | Minus |
BS23325.pep Sequence
Translation from 16 to 2109
> BS23325.pep
MAQFVTHIQPTLMEASQGHVPHHHGHQVGVQHSSHLPHSGHNMPSPPTHN
HHHAHGHGHHTSSGGHHGGAGGHSQKQAAHHSTTSGHAAKGQHHSPPSRI
HSPPTEHHPDHVGHYEYFQHQHEQIFHHEGANGGASHKQQTHHHPNKHEH
CPTGHQSAGDGNTSFLRAARAGNLERVLEHLKNNIDINTSNANGLNALHL
ASKDGHIHVVSELLRRGAIVDSATKKGNTALHIASLAGQEEVVKLLLEHN
ASVNVQSQNGFTPLYMAAQENHDAVVRLLLSNGANQSLATEDGFTPLAVA
MQQGHDKVVAVLLESDTRGKVRLPALHIAAKKDDVKAATLLLDNDHNPDV
TSKSGFTPLHIASHYGNQNIANLLIQKGADVNYSAKHNISPLHVAAKWGK
TNMVSLLLEKGGNIEAKTRDGLTPLHCAARSGHEQVVDMLLERGAPISAK
TKNGLAPLHMAAQGEHVDAARILLYHRAPVDEVTVDYLTALHVAAHCGHV
RVAKLLLDRNADANARALNGFTPLHIACKKNRLKVVELLLRHGASISATT
ESGLTPLHVAAFMGCMNIVIYLLQHDASPDVPTVRGETPLHLAARANQTD
IIRILLRNGAQVDARAREQQTPLHIASRLGNVDIVMLLLQHGAQVDATTK
DMYTALHIAAKEGQDEVKDLIAKKITDHIDTVYLMQLFWIRHQEFFI*
BS23325.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:28:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ank2-PE | 697 | CG34416-PE | 1..697 | 1..697 | 3684 | 100 | Plus |
| Ank2-PK | 4264 | CG34416-PK | 1..667 | 1..667 | 3524 | 100 | Plus |
| Ank2-PR | 4496 | CG34416-PR | 1..667 | 1..667 | 3524 | 100 | Plus |
| Ank2-PW | 1309 | CG42734-PW | 1..667 | 1..667 | 3524 | 100 | Plus |
| Ank2-PV | 4373 | CG42734-PV | 1..667 | 1..667 | 3524 | 100 | Plus |
| Ank2-PK | 4264 | CG34416-PK | 355..902 | 161..671 | 887 | 36.1 | Plus |
| Ank2-PR | 4496 | CG34416-PR | 355..902 | 161..671 | 887 | 36.1 | Plus |
| Ank2-PW | 1309 | CG42734-PW | 355..902 | 161..671 | 887 | 36.1 | Plus |
| Ank2-PK | 4264 | CG34416-PK | 420..944 | 160..681 | 864 | 38.6 | Plus |
| Ank2-PR | 4496 | CG34416-PR | 420..944 | 160..681 | 864 | 38.6 | Plus |
| Ank2-PW | 1309 | CG42734-PW | 420..944 | 160..681 | 864 | 38.6 | Plus |
| Ank2-PK | 4264 | CG34416-PK | 329..838 | 168..673 | 838 | 36.3 | Plus |
| Ank2-PR | 4496 | CG34416-PR | 329..838 | 168..673 | 838 | 36.3 | Plus |
| Ank2-PW | 1309 | CG42734-PW | 329..838 | 168..673 | 838 | 36.3 | Plus |
| Ank2-PK | 4264 | CG34416-PK | 160..541 | 292..673 | 565 | 36.3 | Plus |
| Ank2-PR | 4496 | CG34416-PR | 160..541 | 292..673 | 565 | 36.3 | Plus |
| Ank2-PW | 1309 | CG42734-PW | 160..541 | 292..673 | 565 | 36.3 | Plus |
| Ank2-PK | 4264 | CG34416-PK | 168..512 | 329..677 | 524 | 34.7 | Plus |
| Ank2-PR | 4496 | CG34416-PR | 168..512 | 329..677 | 524 | 34.7 | Plus |
| Ank2-PW | 1309 | CG42734-PW | 168..512 | 329..677 | 524 | 34.7 | Plus |
| Ank2-PK | 4264 | CG34416-PK | 758..1003 | 135..369 | 249 | 27.3 | Plus |
| Ank2-PR | 4496 | CG34416-PR | 758..1003 | 135..369 | 249 | 27.3 | Plus |
| Ank2-PK | 4264 | CG34416-PK | 745..925 | 155..331 | 247 | 32 | Plus |
| Ank2-PR | 4496 | CG34416-PR | 745..925 | 155..331 | 247 | 32 | Plus |
| Ank2-PW | 1309 | CG42734-PW | 745..925 | 155..331 | 247 | 32 | Plus |
| Ank2-PW | 1309 | CG42734-PW | 758..932 | 135..309 | 239 | 32 | Plus |
| Ank2-PK | 4264 | CG34416-PK | 160..317 | 519..676 | 213 | 31 | Plus |
| Ank2-PR | 4496 | CG34416-PR | 160..317 | 519..676 | 213 | 31 | Plus |
| Ank2-PW | 1309 | CG42734-PW | 160..317 | 519..676 | 213 | 31 | Plus |
