BS23330.complete Sequence
386 bp assembled on 2011-01-25
GenBank Submission: KX803870
> BS23330.complete
GAAGTTATCAGTCGACATGCGCTTCTCGATCGTAATTGTTCTTTCCGTCC
TAGGATGCCTCCTGCTTAGCCAGGAGGGCAGTAGCAGCACATCTACATCC
TCGACGACGACCACAACCACCGACTCCTCTGCCACCACTACCACGGCTTC
GTCCGCCACCACTACCACCACTGCCTCTTCCGCATCCACCACGACCACTG
CCTCCTCCTCATCCTCTTCCTCTGCGGAGGCCAGGAGGCGCAGGCGCGCC
CGTCGCCGTCGTCTGGCGCGTGAGAGGCAACGAAGGGAGCGCAGAAGGCA
GCGCAGGACTCAGAGGCTGCGCCAGCAACTGGAGAATCAACGTCGACAGA
TCAACCAGCTGAGCGGATGAAAGCTTTCTAGACCAT
BS23330.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:31:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14452-RA | 354 | CG14452-PA | 1..354 | 17..370 | 1770 | 100 | Plus |
| CG12546-RA | 354 | CG12546-PA | 1..354 | 17..370 | 1770 | 100 | Plus |
| CG32453-RB | 363 | CG32453-PB | 55..258 | 71..274 | 665 | 90.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:31:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14452-RA | 483 | CG14452-RA | 17..372 | 16..371 | 1780 | 100 | Plus |
| CG12546-RA | 489 | CG12546-RA | 23..378 | 16..371 | 1780 | 100 | Plus |
| CG32453-RB | 741 | CG32453-RB | 72..275 | 71..274 | 665 | 90.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:31:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22693435..22693790 | 371..16 | 1780 | 100 | Minus |
| 3L | 28110227 | 3L | 22695969..22696324 | 16..371 | 1780 | 100 | Plus |
| 3L | 28110227 | 3L | 22692255..22692458 | 274..71 | 665 | 90.3 | Minus |
| 3L | 28110227 | 3L | 22697301..22697504 | 71..274 | 665 | 90.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:31:21 has no hits.
BS23330.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:47 Download gff for
BS23330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12546-RA | 17..369 | 17..369 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:58:59 Download gff for
BS23330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12546-RA | 24..376 | 17..369 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:17 Download gff for
BS23330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12546-RA | 24..376 | 17..369 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:17 Download gff for
BS23330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22695970..22696322 | 17..369 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:58:59 Download gff for
BS23330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22689070..22689422 | 17..369 | 100 | | Plus |
BS23330.pep Sequence
Translation from 16 to 369
> BS23330.pep
MRFSIVIVLSVLGCLLLSQEGSSSTSTSSTTTTTTDSSATTTTASSATTT
TTASSASTTTTASSSSSSSAEARRRRRARRRRLARERQRRERRRQRRTQR
LRQQLENQRRQINQLSG*
BS23330.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:48:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14452-PA | 117 | CG14452-PA | 1..117 | 1..117 | 547 | 100 | Plus |
| CG12546-PA | 117 | CG12546-PA | 1..117 | 1..117 | 547 | 100 | Plus |
| CG32453-PB | 120 | CG32453-PB | 1..120 | 1..117 | 408 | 74.2 | Plus |
| CG32453-PA | 120 | CG32453-PA | 1..120 | 1..117 | 408 | 74.2 | Plus |
| CG14454-PB | 120 | CG14454-PB | 1..120 | 1..117 | 408 | 74.2 | Plus |
