BS23352.complete Sequence
1000 bp assembled on 2011-01-25
GenBank Submission: KX800420
> BS23352.complete
GAAGTTATCAGTCGACATGAACGGGAGTCACCTTCAAACGGAGCAGTTGC
TCTTTGAGGAGAGGCCACTCCATGTGCCGCCCCTCTCGGAACTGAAAAGA
GTCATACAGGGTGCTCTGGATGAGAACTTTCGGACCGTAGATGTCAGTGT
GGAAGCTTGCCCGGATTTAAGGGACTCCCAGTTTGGCCTTGTGGAGCGTG
GACTGGGCGGAAAGGCCACTCTCCTAGAAGCAGGAGGGCCACCCTATTTG
CGGCCCTTGGTGCAGCGAGATAAGCTCTACAATCTGAAGGAGATCACTCG
GCGGACCCAAGGAGCAGGAAAGATCTTTGCAGTTGGACCGGGAGCAGGTC
CGTGGCCCATTCGTCACTCCAATTGCGAGGGGATCTTTAATTTCTCGCTA
AACGAAGAGGATGAACTCACTCAAGGAAGCTACACGGCCACTGTGAGGGG
AGCGAATGAGGATTGTGTTCTCGAAAGGATTCCCGAAACCGAATCTCGTG
CTGCTCTGATCCTGAACCTCTTCCTCAGCGAGGGAAAACCAGGTCAAGTG
CTCCGAATTTCCGCAAAACAGCGCACTGGAGGGGAAAACTTTGTAGAATG
CATTCGCAAGGGTCTGGAACGGCACTACGGAGACCAGGTGGTGGGCTTGG
GAGGAATGTTCGTGGTCAGGAGGGGATGTGTCCACCAGCACGTAATGCGA
GATTTTAGCAAGACGCCCATCCACACACAGGAACAGATCCAAAACTGGTT
GAAGTTCTACGAAATGCCCGCCCAGCTAAACGCAGTGGGCACCTTGGTGA
CCAAGGACATGGGACTGGACCTCCGCCTGCAGCACTTCCACTCGTTTTCC
TTTGCAAACTGGGGAGGCCACTATCACTACGACACCACGCCGGACATTGT
GGAGTACGAGGCCTATCTGAACGTGGCCGAAAGAGTGATCCGTGTGGACA
GACCCGTGGCGACCGATCAGTTGGGCAGAGATTGAAGCTTTCTAGACCAT
BS23352.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:32:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32335-RB | 969 | CG32335-PB | 1..969 | 17..985 | 4845 | 100 | Plus |
| CG9119-RA | 969 | CG9119-PA | 22..944 | 38..960 | 1135 | 74.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:32:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32335-RB | 1082 | CG32335-RB | 70..1039 | 16..985 | 4850 | 100 | Plus |
| CG9119-RA | 1212 | CG9119-RA | 178..1100 | 38..960 | 1135 | 74.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:32:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1201914..1202799 | 985..100 | 4430 | 100 | Minus |
| 3L | 28110227 | 3L | 1203428..1204247 | 960..141 | 1115 | 75.7 | Minus |
| 3L | 28110227 | 3L | 1202882..1202967 | 101..16 | 430 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:32:03 has no hits.
BS23352.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:52 Download gff for
BS23352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32335-RB | 65..1032 | 17..984 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:59:17 Download gff for
BS23352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32335-RB | 71..1038 | 17..984 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:34 Download gff for
BS23352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32335-RB | 71..1038 | 17..984 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:34 Download gff for
BS23352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1201915..1202797 | 102..984 | 100 | <- | Minus |
| 3L | 1202882..1202966 | 17..101 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:59:17 Download gff for
BS23352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1201915..1202797 | 102..984 | 100 | <- | Minus |
| arm_3L | 1202882..1202966 | 17..101 | 100 | | Minus |
BS23352.pep Sequence
Translation from 16 to 984
> BS23352.pep
MNGSHLQTEQLLFEERPLHVPPLSELKRVIQGALDENFRTVDVSVEACPD
LRDSQFGLVERGLGGKATLLEAGGPPYLRPLVQRDKLYNLKEITRRTQGA
GKIFAVGPGAGPWPIRHSNCEGIFNFSLNEEDELTQGSYTATVRGANEDC
VLERIPETESRAALILNLFLSEGKPGQVLRISAKQRTGGENFVECIRKGL
ERHYGDQVVGLGGMFVVRRGCVHQHVMRDFSKTPIHTQEQIQNWLKFYEM
PAQLNAVGTLVTKDMGLDLRLQHFHSFSFANWGGHYHYDTTPDIVEYEAY
LNVAERVIRVDRPVATDQLGRD*
BS23352.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:48:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32335-PB | 322 | CG32335-PB | 1..322 | 1..322 | 1702 | 100 | Plus |
| CG9119-PA | 322 | CG9119-PA | 1..322 | 1..322 | 1350 | 76.7 | Plus |
