BS23355.complete Sequence
1112 bp assembled on 2011-01-25
GenBank Submission: KX803782
> BS23355.complete
GAAGTTATCAGTCGACATGTTAACGTTTTGGGAAAAGACATCAAAAAAAT
CAGCAGATATACCAAACCAAATCAGCGGAGCACTTGCATCAAGTAACTTA
GCTATCTGCGCCTGTCTAATAGTAATCTTCATTGCATCTGTAACCACGGC
CAAAACACCGGATCAGGAAGCTATCCATCACAAAAATGACGAATTTCCGG
AAGAGGAAAGCGACATGGTGATGGAGCCAAATGATTTTTCGCCAATCACT
GTACTAAAGTCACATGAACAACACTTTCATATGCCGCCCACAACGCATCT
TCAGCCACAAGTTCAAGCTAGAATTCATCCTAGAGTTCAACCCAGAAAAT
TTCAATCCGCACTCCAACAAAATGCTGAGGAGCCATTCCGGCCCATTGCT
AATCCAAATACGAAGATTGTTGGCGATTCTCATACGCAGGCTGCCCAAAA
TTTCTACCCACCTTTCTACCATGAGGCTCCTCCACTGGGCCATTCCAGAC
CTTACTTTGGTCACGGCCCGCCTGTATCGGAAACAACTCCTTTATCCTTA
CCCCTTCCGCTCTTGACAACTCAACAGCAACAGCCAGCAACTCAGCAGCG
GACTTTCGATGCCAGTATACTTGGAAGTGGGGATTTTGGTGTCCTTAGAG
GTGGAACCTTCTATCCGGAGGAGGAAATGCCCTATCACCCCGAAGATAAC
AGTGATTACATCTATGGAGATGCTAACAATGGACACGGTCGACCATCTGA
GGGTTTTGTTCAAAAGTACACGTATCCAGAGGAGCAGTTCGCTAATTTTC
GCGATTTTGCCGATATCAACACGCCCGCCGATACGGCGTTTTCGCAATTT
GTGGTGGTGTATGCGGCCAAAAATGCCTCTGTACCACACTCTCATCCGCA
TCCTAAAAACATATTTGAACAGTTAGAGCAGCTGGACAGGGAAAAAGAGC
TGAAAAATACCGAATTTGAGAACAAAACTTCTTCGAAAATAAAGTCGAAA
TTGTCTAATACAAAGTTGCAAAAAAAATACCGAAAAAAAACGGCCCCCAA
AGTCCAGGATCCTCAAGAAATAGAGCCTTTACTAGCTCTAAGTTAAAAGC
TTTCTAGACCAT
BS23355.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:32:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32816-RF | 1137 | CG32816-PF | 58..1137 | 17..1096 | 5400 | 100 | Plus |
| CG32816-RE | 1137 | CG32816-PE | 58..1137 | 17..1096 | 5400 | 100 | Plus |
| CG32816-RA | 1137 | CG32816-PA | 58..1137 | 17..1096 | 5400 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:32:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32816-RF | 1834 | CG32816-RF | 310..1389 | 17..1096 | 5400 | 100 | Plus |
| CG32816-RE | 1730 | CG32816-RE | 206..1285 | 17..1096 | 5400 | 100 | Plus |
| CG32816-RA | 1821 | CG32816-RA | 297..1376 | 17..1096 | 5400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:32:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 317021..317929 | 1096..188 | 4545 | 100 | Minus |
| X | 23542271 | X | 333565..333736 | 188..17 | 860 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:32:12 has no hits.
BS23355.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:53 Download gff for
BS23355.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32816-RA | 300..1372 | 22..1094 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:59:20 Download gff for
BS23355.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32816-RB | 286..1358 | 22..1094 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:37 Download gff for
BS23355.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32816-RA | 302..1374 | 22..1094 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:37 Download gff for
BS23355.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 317023..317928 | 189..1094 | 100 | <- | Minus |
| X | 333565..333731 | 22..188 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:59:20 Download gff for
BS23355.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 211056..211961 | 189..1094 | 100 | <- | Minus |
| arm_X | 227598..227764 | 22..188 | 100 | | Minus |
BS23355.pep Sequence
Translation from 16 to 1095
> BS23355.pep
MLTFWEKTSKKSADIPNQISGALASSNLAICACLIVIFIASVTTAKTPDQ
EAIHHKNDEFPEEESDMVMEPNDFSPITVLKSHEQHFHMPPTTHLQPQVQ
ARIHPRVQPRKFQSALQQNAEEPFRPIANPNTKIVGDSHTQAAQNFYPPF
YHEAPPLGHSRPYFGHGPPVSETTPLSLPLPLLTTQQQQPATQQRTFDAS
ILGSGDFGVLRGGTFYPEEEMPYHPEDNSDYIYGDANNGHGRPSEGFVQK
YTYPEEQFANFRDFADINTPADTAFSQFVVVYAAKNASVPHSHPHPKNIF
EQLEQLDREKELKNTEFENKTSSKIKSKLSNTKLQKKYRKKTAPKVQDPQ
EIEPLLALS*
BS23355.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:48:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32816-PF | 378 | CG32816-PF | 20..378 | 1..359 | 1912 | 100 | Plus |
| CG32816-PE | 378 | CG32816-PE | 20..378 | 1..359 | 1912 | 100 | Plus |
| CG32816-PA | 378 | CG32816-PA | 20..378 | 1..359 | 1912 | 100 | Plus |
| CG32816-PB | 378 | CG32816-PB | 20..378 | 1..359 | 1912 | 100 | Plus |
| CG32816-PD | 293 | CG32816-PD | 1..293 | 67..359 | 1573 | 100 | Plus |
