BS23364.complete Sequence
1247 bp assembled on 2011-01-25
GenBank Submission: KX802691
> BS23364.complete
GAAGTTATCAGTCGACATGGAAAAAAAGATCTCATCGTCATCCCAGCCCC
GGATTTTAAAAAAGAAGCACTTCAGGGTTAAGCATCAAAAGGTTAAATTA
TTTAGAGCCAATGAACCAATTTTAAGTGTGTTCATGTGGGGAATAAATCA
CACTATTAATGAATTAAGTCACGTTAATATACCTGTAATGCTTTTGCCGG
ACGATTTTCGAGCTTATTCTAAAATTAAGGTGGATAATCATCTATTTAAT
AAAGAAAACATGCCGTCACATTTCAAAGTCAAGGAATATTGCCCCCTTGT
GTTTCGAAATTTACGTGAAAGATTTGGCGTTGATGATGTTGATTACCGCG
AGTCCTTAACTCGATCCCAACCTATTCAAATTGATTCGTCTGGAAAATCA
GGAGCGCAATTTTATCAGAGTTATGATAAGTTTTTTATAATAAAAAGTTT
GACATCGGAAGAAATTGAACGAATGCACGCATTTTTAAAGCAATACCATC
CGTACGTTGTGGAGAGACACGGAAAAACGCTGTTACCTCAATACTTGGGA
ATGTATCGTATCACTGTAGAAAGCGTGCAATATTACTTCGTTGTCATGAG
GAATGTTTTCAGCTCCCACTTGACAATACACAAAAAGTTTGATTTAAAAG
GTAGCACCGTTGATCGGGAAGCATCAGAAAAGGAACTTGAAAAAAATTTG
CCGACTTTCAAGGACAATGATTTTATAAAACAAAAAGTGAAATTAGACAT
TGGAAAGGAAGCTAAGGACAAACTAATGGACACGCTGAGCAACGATGTGG
ATCTTTTAACCAAGTTGCACATTATGGATTACTCTTTGTTGGTCGGCGTG
CATGACTGTGTTCGTGCAGAGGAGGAAGCTTTGCAGGGAGATAATATACT
AACTGTTGGTCGCAGTGAGAACAGCGAAAGCGAGGAATGCGATAGCGGGG
AACGCTGGACGTATAACACTCCTCCCGATTCTCCAAGAGGTGCACAGTAT
AAGGAAGTCGTTTATGAAGTTGATATATATGACATTCCAAGTATTGAAGA
AAAACGCGAAATTTACTTTATTGCAATTATTGACGTTCTTACACAATATG
GAGTAAAAAAACAGGCAGCTAAAGCAGCCAAAACTGTTAAATATGGCAGT
AATGTTGACGGTATATCAACCTGTGACCCTGAACAATATGCCAAACGATT
CTTGGACTTTATGGATAAAGCTATAGAATAAAAGCTTTCTAGACCAT
BS23364.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:32:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PIP4K-RB | 1215 | CG17471-PB | 1..1215 | 17..1231 | 6075 | 100 | Plus |
| PIP4K-RA | 1215 | CG17471-PA | 1..1215 | 17..1231 | 6075 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:32:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PIP4K-RB | 1443 | CG17471-RB | 112..1327 | 17..1232 | 6080 | 100 | Plus |
| PIP4K-RA | 1493 | CG17471-RA | 162..1377 | 17..1232 | 6080 | 100 | Plus |
| CG33521-RD | 2870 | CG33521-RD | 2420..2539 | 1232..1113 | 600 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:32:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 1195842..1196091 | 502..253 | 1250 | 100 | Minus |
| 4 | 1348131 | 4 | 1195428..1195596 | 802..634 | 845 | 100 | Minus |
| 4 | 1348131 | 4 | 1193708..1193859 | 954..803 | 760 | 100 | Minus |
| 4 | 1348131 | 4 | 1196320..1196457 | 154..17 | 690 | 100 | Minus |
| 4 | 1348131 | 4 | 1195660..1195791 | 633..502 | 660 | 100 | Minus |
| 4 | 1348131 | 4 | 1192535..1192654 | 1232..1113 | 600 | 100 | Minus |
| 4 | 1348131 | 4 | 1196165..1196262 | 252..155 | 490 | 100 | Minus |
| 4 | 1348131 | 4 | 1193560..1193655 | 1049..954 | 480 | 100 | Minus |
| 4 | 1348131 | 4 | 1192705..1192779 | 1115..1041 | 360 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:32:33 has no hits.
BS23364.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:56 Download gff for
BS23364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17471-RB | 104..1316 | 17..1229 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:59:29 Download gff for
BS23364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PIP4K-RA | 162..1374 | 17..1229 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:44 Download gff for
BS23364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PIP4K-RA | 162..1374 | 17..1229 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:44 Download gff for
BS23364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 1196320..1196457 | 17..154 | 100 | | Minus |
| 4 | 1192538..1192652 | 1115..1229 | 100 | <- | Minus |
| 4 | 1192706..1192770 | 1050..1114 | 100 | <- | Minus |
| 4 | 1193560..1193654 | 955..1049 | 100 | <- | Minus |
| 4 | 1193708..1193859 | 803..954 | 100 | <- | Minus |
| 4 | 1195428..1195596 | 634..802 | 100 | <- | Minus |
| 4 | 1195660..1195790 | 503..633 | 100 | <- | Minus |
| 4 | 1195842..1196091 | 253..502 | 100 | <- | Minus |
| 4 | 1196165..1196262 | 155..252 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:59:29 Download gff for
BS23364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 1216468..1216717 | 253..502 | 100 | <- | Minus |
| arm_4 | 1216791..1216888 | 155..252 | 100 | <- | Minus |
| arm_4 | 1216946..1217083 | 17..154 | 100 | | Minus |
| arm_4 | 1213164..1213278 | 1115..1229 | 100 | <- | Minus |
| arm_4 | 1213332..1213396 | 1050..1114 | 100 | <- | Minus |
| arm_4 | 1214186..1214280 | 955..1049 | 100 | <- | Minus |
| arm_4 | 1214334..1214485 | 803..954 | 100 | <- | Minus |
| arm_4 | 1216054..1216222 | 634..802 | 100 | <- | Minus |
| arm_4 | 1216286..1216416 | 503..633 | 100 | <- | Minus |
BS23364.pep Sequence
Translation from 16 to 1230
> BS23364.pep
MEKKISSSSQPRILKKKHFRVKHQKVKLFRANEPILSVFMWGINHTINEL
SHVNIPVMLLPDDFRAYSKIKVDNHLFNKENMPSHFKVKEYCPLVFRNLR
ERFGVDDVDYRESLTRSQPIQIDSSGKSGAQFYQSYDKFFIIKSLTSEEI
ERMHAFLKQYHPYVVERHGKTLLPQYLGMYRITVESVQYYFVVMRNVFSS
HLTIHKKFDLKGSTVDREASEKELEKNLPTFKDNDFIKQKVKLDIGKEAK
DKLMDTLSNDVDLLTKLHIMDYSLLVGVHDCVRAEEEALQGDNILTVGRS
ENSESEECDSGERWTYNTPPDSPRGAQYKEVVYEVDIYDIPSIEEKREIY
FIAIIDVLTQYGVKKQAAKAAKTVKYGSNVDGISTCDPEQYAKRFLDFMD
KAIE*
BS23364.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PIP4K-PB | 404 | CG17471-PB | 1..404 | 1..404 | 2102 | 100 | Plus |
| PIP4K-PA | 404 | CG17471-PA | 1..404 | 1..404 | 2102 | 100 | Plus |
| sktl-PC | 792 | CG9985-PC | 156..573 | 32..403 | 391 | 28 | Plus |
| sktl-PB | 792 | CG9985-PB | 156..573 | 32..403 | 391 | 28 | Plus |
| sktl-PA | 792 | CG9985-PA | 156..573 | 32..403 | 391 | 28 | Plus |
