Clone BS23365 Report

Search the DGRC for BS23365

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:233
Well:65
Vector:pDNR-Dual
Associated Gene/TranscriptCG8736-RB
Protein status:BS23365.pep: gold
Sequenced Size:524

Clone Sequence Records

BS23365.complete Sequence

524 bp assembled on 2011-01-25

GenBank Submission: KX804385

> BS23365.complete
GAAGTTATCAGTCGACATGTTCTGCAAGCTGCTTTTCGCTACCTTCGTGG
CCCTGGCGGTGGCCAAGCCACAACACCAACCTGCTGCCCAGTATCCGGCT
GGCGTGAATCCGCAGGACTGCCCCAACTTCCCCATCTGTGATAATGCGCG
CCTGCACAATCCGCAGCCGCAGTGGGGTGCCCCGCAGCCACAGTGGAACC
CCCAGCCGCAGCCACAGTGGAACCCGCAGCCACAGTGGCAGCAACCTCAA
CCCCAGTGGAACCCCCAGCCGCAGCCACAGTGGCAGGCACAGCCCTCGTG
GAACGCAGCCCCTGCTGCCGCACCCGGTGGCGATAAGTATCCAGCTGGCG
TCAATCCGCAGACCTGCCCCAACTATCCCTACTGCGACGTGAACGCCGGA
CACGCTGGTGCTCCCGTGGCAGCTCCTCCTCTACCTGGCTGGACGGAGCG
TCTGTATCCCGCCGGAGTTTCGCCGCACCAGTGCCCCAACTTCCCGTACT
GCAACTAGAAGCTTTCTAGACCAT

BS23365.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:32:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG8736-RB 492 CG8736-PB 1..492 17..508 2460 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:32:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG8736-RB 764 CG8736-RB 130..630 8..508 2475 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:32:36
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8594165..8594642 508..31 2390 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:32:37 has no hits.

BS23365.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:56 Download gff for BS23365.complete
Subject Subject Range Query Range Percent Splice Strand
CG8736-RB 144..630 22..508 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:59:31 Download gff for BS23365.complete
Subject Subject Range Query Range Percent Splice Strand
CG8736-RB 144..630 22..508 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:46 Download gff for BS23365.complete
Subject Subject Range Query Range Percent Splice Strand
CG8736-RB 144..630 22..508 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:46 Download gff for BS23365.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8594165..8594646 25..508 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:59:31 Download gff for BS23365.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4481670..4482151 25..508 99   Minus

BS23365.pep Sequence

Translation from 16 to 507

> BS23365.pep
MFCKLLFATFVALAVAKPQHQPAAQYPAGVNPQDCPNFPICDNARLHNPQ
PQWGAPQPQWNPQPQPQWNPQPQWQQPQPQWNPQPQPQWQAQPSWNAAPA
AAPGGDKYPAGVNPQTCPNYPYCDVNAGHAGAPVAAPPLPGWTERLYPAG
VSPHQCPNFPYCN*

BS23365.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG8736-PB 163 CG8736-PB 1..163 1..163 978 100 Plus